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LOCUS NM_001382062 3484 bp mRNA linear INV 26-DEC-2023 O (CG32813), mRNA. ACCESSION NM_001382062 VERSION NM_001382062.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3484) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3484) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3484) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3484) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3484) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3484) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3484) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3484) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3484) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3484) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3484) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3484) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3484) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3484) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3484) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3484) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3484) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3484) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3484 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3484 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 488..2587 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RO; CG32813-PO" /codon_start=1 /transl_except=(pos:2204..2206,aa:OTHER) /product="uncharacterized protein, isoform O" /protein_id="NP_001368967.1" /db_xref="FLYBASE:FBpp0428179" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKS ETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSSGAA GGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKPDITIQTVGH IRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHTLLNGLGLSA VNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSHHTAGSTSNS AVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNS SGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKID LINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVLQ TQASTSXSAAKGRFELVGGPAGESESDSDIISIVDIDDGRSREDEQSEDDGENRDQAI TDLTLPDEDEEDDVDEDDSQDALVRDVGVVGGLSSPDTPPHSSPPPAKRSKRQEVTSE LLRQLALQQNQDPQEGC" misc_feature 494..724 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="Myb/SANT-like DNA-binding domain; Region: Myb_DNA-bind_5; pfam13873" /db_xref="CDD:433544" ORIGIN 1 tccaaggttt aaagcaacaa ctgtgagcag tgaaaaaaaa aataacagaa cgagcgttca 61 gctataaacg atatcaaacc caataggaag aaacgcacac aaagagccga aaacaaagtc 121 ttcgccagag agcgctgagt gggacggaga agggaagagg caatagcgag cgggacagcg 181 agcggctggc ggtcagcgac gttggacaag tagttgaaaa tattgcgcat acgccgcgtg 241 aaccagaggc acagagtaga gcagcaagcc gcgcgttctt cgttctgcat cgcacaaata 301 cagctttgag aaagccagca gaggagtggg gtgcaaggaa acacattacg catcgaggag 361 gagaaggagg agaaggagaa gaaggaggag acgaggaggg ccgaggatta gcggctgcga 421 aggaagtcca tttcaaagtg cagccggcca caaatccagc ttcacgacgt cttgcaaacg 481 gttgaaaatg gagaagactc cccggtacac gcagcgggag cggaacatgg tgttgagcta 541 cgcggcgcag tacaaggatg tgatcgagaa caagcgcacg gacgcggagt ccaaccgcaa 601 gaaggacgag gtgtggctgc agatcgccaa ggagttcaac tcgcgggtct accaccagcg 661 cagcgccaag cagctgcgcc agctttacaa gaacatgaag ctgctgctca aaaaggacct 721 atgcggcgag gacaagagca accattcgtt catggacctg ctcaacacgc tgtcgcacca 781 ggagtccgtg gcccagtaca ttgccgagca gctgtcgccg gagggcgcgg gcggtggcgg 841 cggcggcggt aagcaaggcg gcgcgggcaa cggaggcgga aacggacacc aatcggacga 901 ctacgacgac tccaagatgc cccactacca cgagggcatg gacacggacg tgatccttat 961 caagtcggag acaattagcg acaacgagca gacggacaat ggcatggact gcctggacga 1021 ggacgatgac gacgactgct tgagccacaa ggcgccggag gtgtgcctcg aggaggagga 1081 cgacgtgctc tttccaacgg acgtgcgcca gctgcagcag gtgggatcgt ccggagccgc 1141 cggcggtggt gtctccggag gctcccttcc cggaaacatg tctagcaacg ggattaccga 1201 aaccagtcgc cgcgccgcaa gctcgcccgt gtgctccacg aagacctcga ttagttccag 1261 cgggagctac gcatcagcgc ccaaaccgga catcactatc cagaccgtgg gccacatacg 1321 cgtgggcagc tttgccaaca tcaacaagac gctgcagaac ggcggctccg gcacaggagc 1381 tgtcctatca gcggccagca atggcggctc cagtgccagt ggagtgctgc cgctcacagc 1441 ggagcaagtg cagcagcaca cgctgctgaa cggcctagga ttgtccgccg tgaatccggc 1501 tcagtctctg caggcggcca tcaatgccgc ctatgggtcc gccgctccat cttcatcggt 1561 cgccattagc agccgccgca cccctcccac tctgcagttg ccacgccttc agcgcggaaa 1621 catcaacaat agccaccaca ctgccggcag cacaagcaat tccgcggtgg cctccaatgg 1681 agtgcaactg ttgctcaacg gcggccacca cgcacagatg acgcacaacc atttggcgcg 1741 ggacaagaca ggaggcgtgg ccatcggggc ggcgggcagt ttcaacgggt acaacggact 1801 ggcagtggcg ggcacagtgt gcagcgcctt gaacagcagc ggatccggag ccggaagcgg 1861 cgggagcagt gccaacaaca gcggcgtggg cctggggatc ggcggggcac acacgtcggg 1921 cagcggagga agtggcagcg gtgggacgag gagccagcac caggagctga tgaattcgct 1981 gaggatcgag gagagcaagc ggaaaatcga cctgatcaac gcccaaatcg aatactggca 2041 gacgctcacc cgcaagctga acagtcaggc gaatcacatg cccaatcctg cgtgcccgtg 2101 ccacttccct ggagccagtg tgctctcgcc cgtcgccgtg accgccgcta gtgcctcatc 2161 gtccgcttcc gccaatgtgt tgcagacgca ggccagcacc agctagtccg cagccaaggg 2221 gcggttcgaa ctagtcgggg gtcctgcggg cgaaagcgaa agcgacagcg acatcatctc 2281 gatagtggac atagatgatg ggcggtctag ggaggacgag cagtcggagg acgatggcga 2341 gaaccgtgac caggccataa cggacctgac gctacccgac gaagacgagg aagacgatgt 2401 agacgaagat gactcacagg atgccttggt cagggatgtt ggcgtggtgg gcggcctgtc 2461 gtcgccagat acaccgcccc actcctctcc gccgccagcg aagcgctcga agcgccagga 2521 agtcacctcc gagctcctga ggcagctggc cctgcagcag aatcaggatc cccaggaggg 2581 gtgctagtat tttgtctagt ttgctaattt tatacttgct accatggatt gacgcaacca 2641 ctttgtaaca ttaattttac catatatatt tatttacgcc cagtttgagt gccaaaacag 2701 aaaccaagat tggggccttg ccatcgaaaa tgcttgccaa aggacctgct gaaataaccg 2761 gtcataacca ctcgcgaccc actatttatt tgccagccta actgaaacat agcgattcat 2821 ctcattttaa aatgtcttgc gtcgcctatt tttttattgc cttttttttt ctatacatgt 2881 aacgtgttta tttttaagtt ttcctacgag ctgctaccaa aaagaataag aagaagaagg 2941 tgactatctt gaatgtacat ttactttaca aaactagacc ttacttactt acttaattag 3001 agatcgagca gctaagaacg catgaaaatg aaatgtacaa atgtggttcc taatctagtc 3061 cctaaagtca aaagtgaaga acgaaagagc tacagaaaag aaatcgaaat tgttacgcct 3121 agccgagaac ttgtgtatta tttttttata tcgcttagat tgttcccccg aggaaagcat 3181 tgaaggaact gtagctaatt tatgtactta atgaaccagt gaaaccaaac caatgatttg 3241 aaatggtgta aagagaagaa acttgctagt cgccgctgca taactgtgta aatgtggcac 3301 acaaaccatt tagttagtgt tagtgctact gtacgtgtaa aatacaatta attgcctatc 3361 cagacccagt aaccacaatt tacaaggaag cacacaccaa acgaaactga aaaccaagaa 3421 aacaaaacta tttatacaat tttgtaaaca agaacttatt aataaaacaa tgaatttact 3481 ttgt