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LOCUS NM_001382047 2156 bp mRNA linear INV 26-DEC-2023 D (Trxr1), mRNA. ACCESSION NM_001382047 VERSION NM_001382047.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2156) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2156) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2156) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2156) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2156) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2156) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2156) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2156) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2156) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2156) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2156) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2156) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2156) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2156) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2156) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2156) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2156) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2156) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2156 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2156 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /note="Thioredoxin reductase 1" /map="7D22-7E1" /db_xref="FLYBASE:FBgn0020653" /db_xref="GeneID:31760" CDS 240..1817 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /EC_number="1.-.-.-" /EC_number="1.8.1.-" /EC_number="1.8.1.9" /note="CG2151 gene product from transcript CG2151-RD; CG2151-PD; Trxr1-PD; thioredoxin reductase; disulfide reductase; glutathione reductase; thioredoxin reductase-1" /codon_start=1 /product="thioredoxin reductase 1, isoform D" /protein_id="NP_001368975.1" /db_xref="FLYBASE:FBpp0428084" /db_xref="GeneID:31760" /db_xref="FLYBASE:FBgn0020653" /translation="MHLFEFIPASQLVEGEPRHRRSIYRSAYLDIRLREESTKGSYDY DLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM HQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI NGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLD REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGI PFLRKTVPLSVEKQDDGKLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAG VTVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMD YKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLK AVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRL AITKRSGLDPTPASCCS" misc_feature 363..1811 /gene="Trxr1" /locus_tag="Dmel_CG2151" /gene_synonym="2151; anon-WO03040301.185; anon-WO03040301.187; CG2151; Dm-TrxR; Dmel\CG2151; DmTR; DmTrx; DmTrxR; dmtrxr-1; DmTrxR-1; DTR; dTrxR; dTXNRD; dTXNRD2; gr; Gr; GR; l(1)G0154; l(1)G0379; l(1)G0477; l(1)G0481; TH; TRR; Trx; Trxr; TrxR; trxr-1; Trxr-1; TrxR-1; trxr1; TrxR1; TRXR1" /note="thioredoxin and glutathione reductase selenoprotein; Region: TGR; TIGR01438" /db_xref="CDD:273624" ORIGIN 1 gtggacggac ggaagaaagg cgtggccggg ctgggatggg cgtggcttgg tgtgtggcga 61 tgtcgctaga tgattgctcc actttgattc gaactcccac tgacccagtg gcatgtgtgg 121 cattcggcag cactatcgct acctggcaac tgaagccaag gagctcgacg ggattgcacg 181 gtgcagatta cggattgcag gaggccaaac agtcttcgtt ccgcacttct ttggtctgga 241 tgcatctgtt cgaattcata ccggcttccc agttggtcga gggtgaacca cgccaccgga 301 ggagcatcta ccgatccgcc tatctggaca tacgactgcg cgaggagtcc accaaaggat 361 cctacgacta cgaccttatt gtgattggag gcggctcagc tggcctggcc tgcgccaagg 421 aggcagtcct caatggagcc cgtgtggcct gtctggattt cgttaagccc acgcccactc 481 tgggcaccaa gtggggcgtt ggcggcacct gcgtgaacgt gggctgcatt cccaagaagc 541 tgatgcacca ggcctccctt ctgggcgagg ctgtccatga ggcggccgcc tacggctgga 601 acgtggacga aaagatcaag ccagactggc acaagctggt gcagtccgta cagaaccaca 661 tcaagtccgt caactgggtg acccgtgtgg atctgcgcga caagaaagtg gagtacatca 721 atggactggg ctccttcgtg gactcgcaca cactgctggc caagctgaag agcggcgagc 781 gcacaatcac cgcccagacc ttcgtcattg ccgttggcgg ccgaccacgt tatccggata 841 ttcccggtgc tgtcgagtat ggcatcacca gcgatgatct gttcagtttg gaccgcgagc 901 ccggcaagac cctggtggtg ggagctggct acattggctt ggagtgcgct ggattcctga 961 agggtctcgg ctacgagccc actgtgatgg tgcgttctat tgtgctgcgt ggcttcgacc 1021 agcagatggc cgagctggtg gcagcctcga tggaggagcg tggcattccc ttcctccgca 1081 agacggtgcc gctgtccgtg gaaaagcagg atgatggcaa gctgctcgtg aagtacaaga 1141 acgtggagac cggcgaggag gccgaggatg tttacgacac cgttctgtgg gccatcggcc 1201 gcaagggtct ggtggacgat ctgaacctgc ccaatgccgg cgtgactgtg cagaaggaca 1261 agattccagt ggactcccag gaggctacca atgtggcaaa catctacgct gtcggcgata 1321 tcatctatgg caagccagag ctgacgcccg tcgccgtttt ggctggccgt ttgctggccc 1381 gccgcctgta cggaggatct acccagcgca tggactacaa ggatgtggcc accaccgttt 1441 tcacgcccct ggagtacgcc tgcgtcggcc tgagcgagga ggatgccgtc aagcagttcg 1501 gagccgatga gatcgaggtg ttccacggct actacaagcc cacggagttc ttcattcccc 1561 agaagagcgt gcgctactgc tacttgaagg ctgtggccga gcgccatggt gaccagcgcg 1621 tctatggact gcactatatt ggcccggtgg ccggtgaggt tatccaggga ttcgctgccg 1681 ctttgaagtc tggcctgact attaacacgc tgatcaacac cgtgggcatc catcccacta 1741 ccgccgaaga attcacccgg ctggccatca ccaagcgctc cggactggac cccacgccgg 1801 ccagctgctg cagctaaagc gggaacgcag ctcagccgcc tgggacgtgt cgaagccgct 1861 tgctccaccc gaaatcccgt agatgaatgg ttgttgtcgc ggcccagcga tcgatgagtt 1921 caatagttcc gtttcgtttc cacaattaac acccaacaca atagctctgc gcaagggagg 1981 ggcactgggc agcgatggcg ggtggaacga caccagtgga actacccgcg cgaccagccc 2041 aacccacgac tgctgcgccg ccgacatgca ctcaaaattt tgaatttgtt tgaacctatg 2101 aaattaacta tgaaatcccc taaatgtacg gttgaagaat ataatttttc accaac