Stomoxys calcitrans brachyurin (LOC106087102), mRNA.

LOCUS       NM_001311247             962 bp    mRNA    linear   INV 24-JAN-2024
ACCESSION   NM_001311247 XM_013252020
VERSION     NM_001311247.1
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY190633.1.
            
            On Aug 4, 2015 this sequence version replaced XM_013252020.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY190633.1, DN952415.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01915433, SAMN01915459
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
                     /map="4"
     gene            1..962
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="brachyurin"
                     /db_xref="GeneID:106087102"
     exon            1..165
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    19..21
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="upstream in-frame stop codon"
     CDS             88..888
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /codon_start=1
                     /product="brachyurin precursor"
                     /protein_id="NP_001298176.1"
                     /db_xref="GeneID:106087102"
                     /translation="MQKLALPLLVLFIMGALVLAQSAKIEGRIISGQNAYLGQFPWQV
                     IIKLDEYDDLLCGGSIISDSWVLTAAHCCYGYDSLILRFGTIDLYDDTALNMTVTKIE
                     IHPSYNDTNYNNDVCLLQLPESLTFSSTIAPTTLVPSSMVSDDFVGTVATIAGFGITS
                     DEYMEPSPNLLWAQVEIITNEECSDVFESGLVIDSTMCGKGYGVANMSICNGDSGGPL
                     ITKDPNLNWIQIGINSFVALDQCTEGLPSAFARLTSFIPFIQNITGIY"
     sig_peptide     88..147
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
     misc_feature    169..864
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="Trypsin-like serine protease; Region: Tryp_SPc;
                     smart00020"
                     /db_xref="CDD:214473"
     misc_feature    172..174
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     misc_feature    order(298..300,430..432,727..729)
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="active site"
                     /db_xref="CDD:238113"
     misc_feature    order(709..711,787..789,793..795)
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /note="substrate binding sites [chemical binding]; other
                     site"
                     /db_xref="CDD:238113"
     exon            166..938
                     /gene="LOC106087102"
                     /gene_synonym="trypsin"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctaaaagaa agttaaaata gtctagcaag cacattcgtg gtgttataac tactagagcc
       61 agtataaaaa aacgtcagcc cgtaaaaatg cagaaattag cattgccttt attggtactc
      121 ttcattatgg gggcattggt gttggcacaa agtgccaaaa tagagggtcg cataatctct
      181 ggccaaaatg cttatcttgg acaattcccc tggcaagtca tcattaaact ggatgaatat
      241 gatgatctct tatgcggagg ctccattatt tccgattcct gggttttgac tgcagcccat
      301 tgctgttacg gctatgattc gttgatttta agatttggca ccatagatct atatgatgat
      361 actgccctta acatgacagt caccaaaatc gaaatccatc ccagctataa tgataccaat
      421 tataacaatg atgtctgttt gctgcaatta cccgaatctt tgacatttag tagcaccatt
      481 gcgcccacaa ctctggtacc ttcttcaatg gtctctgatg attttgtggg aactgttgcc
      541 acaattgctg gatttggcat tacgagcgat gaatacatgg agccttcgcc caatctgctg
      601 tgggcccaag ttgagattat caccaatgaa gagtgcagtg atgttttcga atcaggcctg
      661 gtcattgatt ccaccatgtg cggcaagggt tatggtgtag ccaatatgtc tatttgtaat
      721 ggagattctg gtggtccatt gatcaccaaa gatcccaatt taaattggat acaaattggt
      781 atcaattcat ttgtggcttt ggatcagtgt accgaaggtt tgccgtcggc ctttgctaga
      841 ttgacttcgt ttataccttt tatacaaaat ataactggaa tttactaaat aatccagaga
      901 aattccaaat aaatttctct tattacatga agaaaaaaaa aaaaaaaaaa aaaaaaaaaa
      961 aa