Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_001298271 2222 bp mRNA linear INV 26-DEC-2023 transcript variant D (IP3K2), mRNA. ACCESSION NM_001298271 VERSION NM_001298271.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2222) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2222) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2222) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2222) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2222) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2222) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2222) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2222) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2222) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2222) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2222) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2222) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2222) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2222) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2222) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2222) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2222) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2222) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2222 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2222 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /note="Inositol 1,4,5-triphosphate kinase 2" /map="11E9-11E11" /db_xref="FLYBASE:FBgn0283680" /db_xref="GeneID:32285" CDS 515..1918 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /EC_number="2.7.1.127" /note="CG45017 gene product from transcript CG45017-RD; CG45017-PD; IP3K2-PD; wavy" /codon_start=1 /product="inositol 1,4,5-triphosphate kinase 2, isoform D" /protein_id="NP_001285200.1" /db_xref="FLYBASE:FBpp0310582" /db_xref="GeneID:32285" /db_xref="FLYBASE:FBgn0283680" /translation="MALYPSSSRPRTLMEQLLARKIEAAAAAGGAPSAATATPTASGS ATPTPSPTSPNPPAVGGMGLPMPLTLGLGLGLGMGMGVVSRLRRTDSLDSTSSLGSLA FGEDVCRCDDCLLGIVDLYVISAAEAAKKKSSGWRKIRNIVQWTPFFQTYKKQRYPWV QLAGHQGNFKAGPEPGTVLKKLCPKEEECFQILMHDLLRPYVPVYKGQVTSEDGELYL QLQDLLSDYVQPCVMDCKVGVRTYLEEELSKAKEKPKLRKDMYDKMIQIDSHAPTAEE HAAKAVTKPRYMVWRETISSTATLGFRIEGIKKSDGTSSKDFKTTKSREQIKLAFLEF LSGHPHILPRYIQRLRAIRATLAVSEFFQTHEVIGSSLLFVHDQTHASIWLIDFAKTV ELPPQLRIDHYSAWKVGNHEDGYLIGINNLIDIFVELQASMEAEAHAQAQAEAIQSPV SGSGGDQAEQTGEESKP" misc_feature 1163..1792 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /note="Inositol polyphosphate kinase; Region: IPK; pfam03770" /db_xref="CDD:397715" ORIGIN 1 ggttgttagt tggatagcag ccggatagct tggcttgttg ccgctgtaac ggcgatgcct 61 cagtcgcccg agtgccgttc caaagtcaac aagcggtcga tcgagcagct ccgatccaat 121 tcgtttcgat acgcggccat ataccctaac cataccatac tatactatag catatatcca 181 tacccatacg atacggatac ggatacgata acaagataga aaacaaaagg aaaatcgtga 241 aaacaatttt cagtggagga ttcccagtga gtgagcagta tgtgccaact atcgcttagc 301 taaaaataga gattatcgga atctcgattg gaattagaaa catatcgtat cgcgaagggg 361 caaacgaaag acttaggcaa agaactcgcc gcctgcggag gtggacggag gaggaccagg 421 aggagcggca gagggagcgg caggaggaga gcggctagga gaagggcccg ttgcaggtgc 481 aacagccgca gtgggtggca atcgcctggc ggacatggcc ctgtatccat cctcgtcgcg 541 accgcggacg ctcatggagc agctgctggc acgcaagatt gaggctgctg ccgcagcggg 601 cggcgctccc tccgccgcta ccgcaactcc taccgcttcc ggctcggcca cgcccacgcc 661 ctcgccaaca tcacccaatc cgccagcggt cggcggcatg ggactgccca tgccactgac 721 cctgggcctg ggcttgggcc tgggcatggg catgggcgtg gttagccgcc tgcgacgcac 781 cgactccttg gactccacca gcagcctggg ttcgctggcc ttcggcgagg atgtgtgccg 841 ctgcgacgac tgccttctgg gcatcgtcga tctctacgtg attagtgccg ccgaggcggc 901 gaagaagaag agctccggct ggcgaaagat tcgcaacatc gttcagtgga cgcccttctt 961 tcagacgtac aagaagcagc gctatccatg ggttcaactg gccggacacc agggcaactt 1021 caaggcaggt cccgaaccgg gcaccgtgct caagaagctc tgtcccaagg aggaggagtg 1081 cttccagatt ctcatgcacg atctgcttag gccctatgtg cccgtttaca agggtcaggt 1141 gaccagcgag gatggcgaac tttacctgca gctgcaggat ctgctcagtg actatgtgca 1201 gccatgcgtc atggactgca aggtgggtgt gcgcacctat ctggaggagg agctgtccaa 1261 ggccaaggag aagcccaagc tgcgcaagga tatgtacgac aagatgatcc aaatcgacag 1321 ccacgctccc accgccgagg agcacgcagc caaggcggtg accaagccac gttacatggt 1381 ctggcgtgag accatctcca gcacggccac gctgggattc cgcatcgagg gcatcaagaa 1441 gagcgatggc accagttcca aagatttcaa aacgacgaag tcacgcgaac aaatcaagtt 1501 ggcctttctc gagttcctca gcggtcaccc acatattttg ccccgctaca tacagcgttt 1561 gcgagccata agggccaccc ttgcggtctc ggaattcttc cagacccacg aggttatcgg 1621 cagctccctg ctcttcgtcc acgatcagac ccacgccagc atatggctaa ttgatttcgc 1681 caagacggtg gagctgccgc cgcagctgcg gatcgatcac tactccgcct ggaaggtggg 1741 caaccacgaa gatggctatc tcatcggtat caacaatctc attgatatct ttgtggagct 1801 gcaggcatcc atggaggcgg aggcgcatgc gcaagcgcag gcggaggcca ttcagtcacc 1861 cgtttctggt tctggaggag atcaagcgga gcagacgggt gaagagagca aaccctaatg 1921 ggaaatccat acatttccac acggaggttt ggggctgggc cccggagaca aagacatttc 1981 caatttccga atcgattaat ccccaattcc taggcttagt tatacatttt ttttttgttt 2041 ttttctaaca gtttgcgtac atttaacccc ttaagtttaa aatcaaagac tgaaatcaca 2101 atatgcatac acatattttt taatatatac gatatacgcg tacatataca tatatagaag 2161 atatatagcc tggcctatat gtgctgctgc tgctgctgta gtgtaattta tttatccaaa 2221 ac