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LOCUS NM_001298260 2887 bp mRNA linear INV 26-DEC-2023 10, transcript variant B (MFS10), mRNA. ACCESSION NM_001298260 VERSION NM_001298260.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2887) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2887) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2887) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2887) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2887) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2887) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2887) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2887) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2887) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2887) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2887) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2887) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2887) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2887) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2887) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2887) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2887) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2887) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2887 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2887 /gene="MFS10" /locus_tag="Dmel_CG4330" /gene_synonym="AA202479; CG4330; Dmel\CG4330" /exception="dicistronic gene" /note="Major Facilitator Superfamily Transporter 10" /map="11E1-11E1" /db_xref="FLYBASE:FBgn0030452" /db_xref="GeneID:32263" CDS 805..2484 /gene="MFS10" /locus_tag="Dmel_CG4330" /gene_synonym="AA202479; CG4330; Dmel\CG4330" /note="CG4330 gene product from transcript CG4330-RB; CG4330-PB; MFS10-PB" /codon_start=1 /product="major facilitator superfamily transporter 10, isoform B" /protein_id="NP_001285189.1" /db_xref="FLYBASE:FBpp0308734" /db_xref="GeneID:32263" /db_xref="FLYBASE:FBgn0030452" /translation="MPPHKWTDESRDASCYYDPSTSSNSSASAERSDDEADDEREAFC SGERPLIRSSGAAEENHGCGPKTRHIFGFMGFLGFAVVYAMRVNLSVAIVAMVNQTAI PHSNSSVIDTDTCPLPAPHHNGSDPNPQKEGEFVWDEATQGLVLGSFFYGYVLTQVPG GRMAELYGGKKIYGYGVLITAVFTLITPLAAHWDLPLLVLVRILEGMGEGVTYPAMHA MLAHWIPPLERNKFAAIVYAGSNIGTVISMPLAGWLCSLDFLGGWPSAFYIFGLLGIL WFIAWMYLVYDKPSDHPRISESEREYIERSLQVQRLINQDLAEAEEEEGQDEVSLRAP PEEPIPWSSLLTSVPLWAILLTQCGQGWAFYTQLTELPTYMSNILHFDIQSNALLNAV PYLTSWFVGIACSALADWMLARRYISLLNSYKLWNTVASVVPSLGLIGIIYVGCDWVW VTFMLAGVGSFGGAVYAGNQMNHIALSPRYAGTMYGITNSAANICGFLAPYVIGLIIN HRETLTQWHLVFWLAAGLNIAGNFIYLIFASAEEQSWSKTPPTRNSRSQRA" misc_feature 1021..2418 /gene="MFS10" /locus_tag="Dmel_CG4330" /gene_synonym="AA202479; CG4330; Dmel\CG4330" /note="Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; Region: MFS_SLC17; cd17318" /db_xref="CDD:340876" misc_feature order(1048..1053,1060..1065,1072..1074,1273..1275, 1429..1434,1438..1446,1453..1455,1513..1515,1522..1527, 1534..1536,1873..1875,1882..1887,1894..1902,1909..1911, 1993..1995,2005..2007,2182..2187,2197..2199,2209..2211, 2257..2259,2266..2271,2278..2283,2290..2292) /gene="MFS10" /locus_tag="Dmel_CG4330" /gene_synonym="AA202479; CG4330; Dmel\CG4330" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340876" ORIGIN 1 gtttgtgtgt gtgtgtaaac taactgtaac taaacaaaga tagtatactt aagttagttc 61 acaacaatac aattcacact gcactctctt ctcttctcgc acatcacccc ctttctcttt 121 ggccctctct aatgctctct ctctcaccca ctctctttcg ttcttgcatc cccttctgtg 181 acgtagcgcc gcaccattca tgctccactt tcacacggga gagagcgaga acgccacaga 241 gccagccatt agagagggag cgagctgtgg tgactccaaa cgcagtggcg cagcaaaagg 301 ggcaactaaa caatgactga aattcccaaa gaactacgcc atcattctat cgccagaaag 361 tatttactct tctcactcga ggaatcccct ctgtgatttt ggctcgccac cccacaacta 421 cgccactgtt acccctcttg tggttagaag ctacgtttgc tggcgctgcc ttttgcttag 481 gtttgttgtt gcgctgtccg ttgcccgttg ccatttgcca gtccgtcagt ctgcgctggt 541 tcccgctggc gtggtgaggt gtccgctcgc gttgccgctc ccgttcccgc tcccgctcac 601 acggctcttg attttggtgg acaagcaaac cgcttccgcc accgctggcg atacaaatac 661 aataactaca ctacagctgc cgctccggca gagaaaatgc gttggcagtt gcagttccaa 721 acgctcaaaa gacgctcgaa aagcacagac cgccaagcac caacatctcc aatcggaatc 781 cacgaaacca aatagagcgc cacgatgcca ccgcacaaat ggacggacga gtcgcgggac 841 gcctcctgtt actacgatcc atccacctcc tccaattcat ccgcctcggc ggagcgctcc 901 gacgacgaag cggacgacga acgggaggcg ttttgctccg gcgaacgacc gctaatccgc 961 tccagcggcg ctgcggagga aaaccatggc tgtggcccaa agacgcgtca cattttcgga 1021 ttcatgggct tcctgggatt cgccgtggtc tacgcgatgc gggtcaatct gtcggtggcc 1081 attgtggcca tggtgaacca aacggcaatt ccgcacagca actcatcggt gattgatacg 1141 gacacgtgtc cactaccggc accacatcac aatggtagcg atcccaatcc gcagaaggag 1201 ggcgagtttg tgtgggacga ggccacgcag ggattggtgc tcggcagttt cttctatggc 1261 tatgtgctaa cccaagtgcc cggcggacgg atggccgagc tgtatggtgg gaagaagatc 1321 tacggctatg gagtgttgat cacggcggtc tttacgctta taactccatt ggctgcccac 1381 tgggatctgc cgctgttggt cctggtccgc atcctggagg gaatgggcga gggcgtcacc 1441 tatccagcta tgcacgccat gcttgcccac tggataccgc cgctggagag gaacaagttc 1501 gccgcaatcg tctatgcggg ctccaatatc ggaacagtca tttccatgcc gctggccgga 1561 tggctgtgct cgctggactt cctgggtggc tggccgtcgg ctttctacat cttcggactg 1621 ttgggcattc tgtggttcat cgcatggatg tatttggtgt acgacaagcc tagcgatcat 1681 cccaggatct cagaatcgga gcgagagtat atcgaaagga gtctacaggt tcagaggcta 1741 ataaatcagg atctagcgga ggccgaggaa gaggagggac aggatgaagt gagtctgcgg 1801 gcgccgccgg aggaaccgat accctggtca tcgctgctca catccgtacc tctgtgggcc 1861 atcttgttga cgcaatgcgg ccagggatgg gccttctaca cgcagctaac cgagctgccc 1921 acctacatga gcaacatcct acactttgac atccagtcga atgctctgct caatgcggtg 1981 ccgtatctaa cctcctggtt cgtgggcatt gcctgctccg ccctggcgga ttggatgcta 2041 gccagacgct acatatcgct gctgaactcg tataagttgt ggaacacggt ggcctccgtg 2101 gtgccatcac tgggcctgat tggcatcatc tatgtgggct gcgattgggt gtgggtcacc 2161 tttatgttgg ccggcgtggg ctctttcggc ggcgccgtct atgctggcaa ccagatgaat 2221 cacatagcgc tcagtccacg atatgcaggc accatgtatg gcatcaccaa ttcggcggca 2281 aatatctgtg gcttcctggc tccgtatgtc atcggtctaa tcatcaatca tcgcgagact 2341 ctgacacagt ggcatctggt cttctggctg gcggcgggct tgaatatagc cggtaacttc 2401 atctacctga tcttcgccag cgccgaggag caaagctggt cgaagacacc acccacacgc 2461 aactcacgat cccagcgcgc ttgaagcaag cctaactata cgctatttta gctagatcat 2521 aagcatttgt gataattccg atatatacac atatatccta catatgtatt tgggctcgaa 2581 gttttccgga tgcaggacaa gaatgtggct tccaaaaaga aaaaaaaaaa acgaaacgaa 2641 cgaaactagt gctaccaaat cggaatggaa aatcgaaagg atgttaactg ttttagtgta 2701 ttatatacgt gtatcgtcct tttatatgga cttttgtttt gctaggcgtc ttttttttgt 2761 aaacaattat accaatacca actatatata tatatacata tatatttata tatctatcat 2821 atacacgctc gaaggcacgt agatctgtcg aaataaacag cacaaacata tcgaactgtg 2881 gcacctg