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LOCUS NM_001298257 3329 bp mRNA linear INV 26-DEC-2023 C (CG15717), mRNA. ACCESSION NM_001298257 VERSION NM_001298257.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3329) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3329) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3329) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3329) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3329) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3329) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3329) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3329) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3329) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3329) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3329) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3329) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3329) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3329) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3329) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3329) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3329) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3329) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3329 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3329 /gene="CG15717" /locus_tag="Dmel_CG15717" /gene_synonym="Dmel\CG15717" /exception="dicistronic gene" /map="11E1-11E1" /db_xref="FLYBASE:FBgn0030451" /db_xref="GeneID:32262" CDS 85..843 /gene="CG15717" /locus_tag="Dmel_CG15717" /gene_synonym="Dmel\CG15717" /EC_number="1.-.-.-" /EC_number="1.2.1.-" /note="CG15717 gene product from transcript CG15717-RC; CG15717-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_001285186.1" /db_xref="FLYBASE:FBpp0308733" /db_xref="GeneID:32262" /db_xref="FLYBASE:FBgn0030451" /translation="MASNFTQSQPSRITSYMVNQLQPTAQETKLALIPSAPQWRSPQL MVVFEDGDLHSARHQLLQSLQNPFAEGSVATLLLQESIADQFVGLVAQDLRPLSQEVS KHPSYTSTLAKIEELKAKTVQGESLKAGESPVLVYDCVHSYLGNGATGVVTVHTFRTA KEAGQLAKRDPLPYGQVSLWNEKLGCAYELIPRLPSDIVAINCFNPDLDPIWESFAAD RNDVLLAKNYHYESLVVSGKRRIVVFPVGTIFGN" misc_feature 196..834 /gene="CG15717" /locus_tag="Dmel_CG15717" /gene_synonym="Dmel\CG15717" /note="Protein of unknown function (DUF1487); Region: DUF1487; pfam07368" /db_xref="CDD:254173" ORIGIN 1 tgcgtgtgtg tatgtttgcg tgagccgctg ataacgcagc tgatcgggcg attccattga 61 attcaagttt tcaattcgca gagcatggcc agcaacttca cccagtccca gccgtccagg 121 atcaccagct acatggtcaa ccagctgcag ccgacggcgc aggaaacgaa gttggcgctg 181 attcccagtg caccccagtg gcgctccccc cagctgatgg tcgtcttcga ggacggtgat 241 ctgcactcag cgcgccacca gttgctccag tccctgcaga atccctttgc cgagggatcg 301 gtggccacgt tgctactcca ggagagcatt gccgatcagt ttgtgggcct agtggcgcag 361 gatttgcgtc cgttgtcgca ggaggtgtcc aagcatccga gctacaccag cacgctggcc 421 aagatcgaag agctgaaggc caagacagta caaggcgaaa gccttaaggc tggggaatca 481 cccgtcttgg tgtacgactg cgtgcacagc tatctgggca atggagcgac gggagtggtg 541 acggtgcaca cattccgcac agccaaggag gccggccagt tggccaaaag ggatccccta 601 ccttacggcc aagttagtct gtggaatgag aagctgggct gcgcctacga actgatacca 661 cgactaccga gcgatattgt ggccattaat tgcttcaatc cggacttgga tcccatctgg 721 gaatcctttg ctgccgaccg caacgatgtt ctgctggcca agaactatca ctatgaatcg 781 ctggtggtga gcggcaaacg gaggatcgtc gtctttcccg tgggcaccat cttcggcaac 841 tgaagagtga cagttctgga cttcgacggc gacgaatcac atccggaagg aattacatcc 901 agcgccgcac cattcatgct ccactttcac acgggagaga gcgagaacgc cacagagcca 961 gccattagag agggagcgag ctgtggtgac tccaaacgca gtggcgcagc aaaaggggca 1021 actaaacaat gactgaaatt cccaaagaac tacgccatca ttctatcgcc agaaagtatt 1081 tactcttctc actcgaggaa tcccctctgt gattttggct cgccacccca caactacgcc 1141 actgttaccc ctcttgtggt tagaagctac gtttgctggc gctgcctttt gcttaggttt 1201 gttgttgcgc tgtccgttgc ccgttgccat ttgccagtcc gtcagtctgc gctggttccc 1261 gctggcgtgg tgaggtgtcc gctcgcgttg ccgctcccgt tcccgctccc gctcacacgg 1321 ctcttgattt tggtggacaa gcaaaccgct tccgccaccg ctggcgatac aaatacaata 1381 actacactac agctgccgct ccggcagaga aaatgcgttg gcagttgcag ttccaaacgc 1441 tcaaaagacg ctcgaaaagc acagaccgcc aagcaccaac atctccaatc ggaatccacg 1501 aaaccaaata gagcgccacg atgccaccgc acaaatggac ggacgagtcg cgggacgcct 1561 cctgttacta cgatccatcc acctcctcca attcatccgc ctcggcggag cgctccgacg 1621 acgaagcgga cgacgaacgg gaggcgtttt gctccggcga acgaccgcta atccgctcca 1681 gcggcgctgc ggaggaaaac catggctgtg gcccaaagac gcgtcacatt ttcggattca 1741 tgggcttcct gggattcgcc gtggtctacg cgatgcgggt caatctgtcg gtggccattg 1801 tggccatggt gaaccaaacg gcaattccgc acagcaactc atcggtgatt gatacggaca 1861 cgtgtccact accggcacca catcacaatg gtagcgatcc caatccgcag aaggagggcg 1921 agtttgtgtg ggacgaggcc acgcagggat tggtgctcgg cagtttcttc tatggctatg 1981 tgctaaccca agtgcccggc ggacggatgg ccgagctgta tggtgggaag aagatctacg 2041 gctatggagt gttgatcacg gcggtcttta cgcttataac tccattggct gcccactggg 2101 atctgccgct gttggtcctg gtccgcatcc tggagggaat gggcgagggc gtcacctatc 2161 cagctatgca cgccatgctt gcccactgga taccgccgct ggagaggaac aagttcgccg 2221 caatcgtcta tgcgggctcc aatatcggaa cagtcatttc catgccgctg gccggatggc 2281 tgtgctcgct ggacttcctg ggtggctggc cgtcggcttt ctacatcttc ggactgttgg 2341 gcattctgtg gttcatcgca tggatgtatt tggtgtacga caagcctagc gatcatccca 2401 ggatctcaga atcggagcga gagtatatcg aaaggagtct acaggttcag aggctaataa 2461 atcaggatct agcggaggcc gaggaagagg agggacagga tgaagtgagt ctgcgggcgc 2521 cgccggagga accgataccc tggtcatcgc tgctcacatc cgtacctctg tgggccatct 2581 tgttgacgca atgcggccag ggatgggcct tctacacgca gctaaccgag ctgcccacct 2641 acatgagcaa catcctacac tttgacatcc agtcgaatgc tctgctcaat gcggtgccgt 2701 atctaacctc ctggttcgtg ggcattgcct gctccgccct ggcggattgg atgctagcca 2761 gacgctacat atcgctgctg aactcgtata agttgtggaa cacggtggcc tccgtggtgc 2821 catcactggg cctgattggc atcatctatg tgggctgcga ttgggtgtgg gtcaccttta 2881 tgttggccgg cgtgggctct ttcggcggcg ccgtctatgc tggcaaccag atgaatcaca 2941 tagcgctcag tccacgatat gcaggcacca tgtatggcat caccaattcg gcggcaaata 3001 tctgtggctt cctggctccg tatgtcatcg gtctaatcat caatcatcgc gagactctga 3061 cacagtggca tctggtcttc tggctggcgg cgggcttgaa tatagccggt aacttcatct 3121 acctgatctt cgccagcgcc gaggagcaaa gctggtcgaa gacaccaccc acacgcaact 3181 cacgatccca gcgcgcttga agcaagccta actatacgct attttagcta gatcataagc 3241 atttgtgata attccgatat atacacatat atcctacata tgtatttggg ctcgaagttt 3301 tccggatgca ggacaagaat gtggcttcc