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Drosophila melanogaster radish (rsh), transcript variant J, mRNA.


LOCUS       NM_001298248            9220 bp    mRNA    linear   INV 26-DEC-2023
ACCESSION   NM_001298248
VERSION     NM_001298248.1
DBLINK      BioProject: PRJNA164
            BioSample: SAMN02803731
KEYWORDS    RefSeq.
SOURCE      Drosophila melanogaster (fruit fly)
  ORGANISM  Drosophila melanogaster
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE   1  (bases 1 to 9220)
  AUTHORS   Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St
            Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K.,
            Strelets,V., Russo,S.M. and Gelbart,W.M.
  CONSRTM   FlyBase Consortium
  TITLE     Gene Model Annotations for Drosophila melanogaster: Impact of
            High-Throughput Data
  JOURNAL   G3 (Bethesda) 5 (8), 1721-1736 (2015)
   PUBMED   26109357
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9220)
  AUTHORS   Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St
            Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B.,
            Russo,S.M. and Gelbart,W.M.
  CONSRTM   FlyBase Consortium
  TITLE     Gene Model Annotations for Drosophila melanogaster: The
            Rule-Benders
  JOURNAL   G3 (Bethesda) 5 (8), 1737-1749 (2015)
   PUBMED   26109356
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 9220)
  AUTHORS   Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I.,
            Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R.,
            Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G.,
            Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N.,
            Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A.,
            Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E.
  TITLE     The Release 6 reference sequence of the Drosophila melanogaster
            genome
  JOURNAL   Genome Res 25 (3), 445-458 (2015)
   PUBMED   25589440
REFERENCE   4  (bases 1 to 9220)
  AUTHORS   Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M.,
            Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F.,
            Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E.
  TITLE     Sequence finishing and mapping of Drosophila melanogaster
            heterochromatin
  JOURNAL   Science 316 (5831), 1625-1628 (2007)
   PUBMED   17569867
REFERENCE   5  (bases 1 to 9220)
  AUTHORS   Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
  TITLE     The Release 5.1 annotation of Drosophila melanogaster
            heterochromatin
  JOURNAL   Science 316 (5831), 1586-1591 (2007)
   PUBMED   17569856
  REMARK    Erratum:[Science. 2007 Sep 7;317(5843):1325]
REFERENCE   6  (bases 1 to 9220)
  AUTHORS   Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D.,
            Ashburner,M. and Anxolabehere,D.
  TITLE     Combined evidence annotation of transposable elements in genome
            sequences
  JOURNAL   PLoS Comput Biol 1 (2), 166-175 (2005)
   PUBMED   16110336
REFERENCE   7  (bases 1 to 9220)
  AUTHORS   Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A.,
            Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A.,
            Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W.,
            Celniker,S.E., Rubin,G.M. and Karpen,G.H.
  TITLE     Heterochromatic sequences in a Drosophila whole-genome shotgun
            assembly
  JOURNAL   Genome Biol 3 (12), RESEARCH0085 (2002)
   PUBMED   12537574
REFERENCE   8  (bases 1 to 9220)
  AUTHORS   Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J.,
            Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E.,
            Rubin,G.M., Ashburner,M. and Celniker,S.E.
  TITLE     The transposable elements of the Drosophila melanogaster
            euchromatin: a genomics perspective
  JOURNAL   Genome Biol 3 (12), RESEARCH0084 (2002)
   PUBMED   12537573
REFERENCE   9  (bases 1 to 9220)
  AUTHORS   Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S.,
            Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E.,
            Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L.,
            Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D.,
            Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J.,
            Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M.,
            Rubin,G.M. and Lewis,S.E.
  TITLE     Annotation of the Drosophila melanogaster euchromatic genome: a
            systematic review
  JOURNAL   Genome Biol 3 (12), RESEARCH0083 (2002)
   PUBMED   12537572
REFERENCE   10 (bases 1 to 9220)
  AUTHORS   Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W.,
            Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E.,
            Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M.,
            Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S.,
            Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M.,
            Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W.,
            Gibbs,R.A. and Rubin,G.M.
  TITLE     Finishing a whole-genome shotgun: release 3 of the Drosophila
            melanogaster euchromatic genome sequence
  JOURNAL   Genome Biol 3 (12), RESEARCH0079 (2002)
   PUBMED   12537568
REFERENCE   11 (bases 1 to 9220)
  AUTHORS   Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D.,
            Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F.,
            George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N.,
            Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X.,
            Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D.,
            Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L.,
            Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D.,
            Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M.,
            Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S.,
            Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P.,
            Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A.,
            Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B.,
            Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I.,
            Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S.,
            Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C.,
            Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S.,
            Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z.,
            Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J.,
            Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J.,
            Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z.,
            Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C.,
            Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A.,
            Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C.,
            McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C.,
            Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L.,
            Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K.,
            Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S.,
            Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K.,
            Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I.,
            Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C.,
            Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R.,
            Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A.,
            Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT,
            Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F.,
            Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H.,
            Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O.,
            Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C.
  TITLE     The genome sequence of Drosophila melanogaster
  JOURNAL   Science 287 (5461), 2185-2195 (2000)
   PUBMED   10731132
REFERENCE   12 (bases 1 to 9220)
  AUTHORS   Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R.,
            Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R.,
            Smith,E., Yu,C. and Rubin,G.
  CONSRTM   Berkeley Drosophila Genome Project
  TITLE     Drosophila melanogaster release 4 sequence
  JOURNAL   Unpublished
REFERENCE   13 (bases 1 to 9220)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   14 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2023) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   15 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   16 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2020) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   17 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (22-APR-2019) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   18 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2018) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   19 (bases 1 to 9220)
  CONSRTM   FlyBase
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2016) FlyBase, Harvard University, Biological
            Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE   20 (bases 1 to 9220)
  AUTHORS   Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R.,
            Park,S., Svirskas,R. and Karpen,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
            Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne
            Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
  REMARK    Direct Submission
REFERENCE   21 (bases 1 to 9220)
  AUTHORS   Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S.,
            Svirskas,R. and Rubin,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
            Lawrence Berkeley National Laboratory, One Cyclotron Road, MS
            64-121, Berkeley, CA 94720, USA
  REMARK    Direct Submission
REFERENCE   22 (bases 1 to 9220)
  AUTHORS   Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
  CONSRTM   Drosophila Heterochromatin Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project,
            Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron
            Road, Mailstop 64-121, Berkeley, CA 94720, USA
REFERENCE   23 (bases 1 to 9220)
  AUTHORS   Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive,
            Rockville, MD 20850, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by FlyBase. This
            record is derived from an annotated genomic sequence (NC_004354).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: FlyBase
            Annotation Status   :: Full annotation
            Annotation Version  :: Release 6.54
            URL                 :: http://flybase.org
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9220
                     /organism="Drosophila melanogaster"
                     /mol_type="mRNA"
                     /db_xref="taxon:7227"
                     /chromosome="X"
                     /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2]
                     bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]"
     gene            1..9220
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="radish"
                     /map="11D6-11D10"
                     /db_xref="FLYBASE:FBgn0265597"
                     /db_xref="GeneID:32253"
     CDS             624..5948
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="CG44424 gene product from transcript CG44424-RJ;
                     CG44424-PJ; rsh-PJ; radish"
                     /codon_start=1
                     /product="radish, isoform J"
                     /protein_id="NP_001285177.1"
                     /db_xref="FLYBASE:FBpp0309309"
                     /db_xref="GeneID:32253"
                     /db_xref="FLYBASE:FBgn0265597"
                     /translation="MTMTAICFVCNLPIMSHQVGLVWQGGNGWDDLVREQLEESTIRQ
                     RLGGRRDSAAQITTPPSTSPPPGLQRRRRSSLAQLTDILREWSGGTKQQQQHHSQQQQ
                     QQLQQASRSKAQLNRRETLADLARSLPWRTSTTTDASTGAGGSGGGGCTTYMAPRKRR
                     ESSADSGIRSMRSRRDSNTAEFVRHWNRRESGAVEEQPSVSVPVVVECSKSASRRGSG
                     ESYLSSSRRDSNVAGRVTTPPPPGKYQMTKKRDSLAAPEFPNFRQEQRPSTSSAGSCS
                     DHSMPLISTHSSTHHLAHQQVDSACQALPPPTIITSSVTPPATSPTAPKGRRDSQTQC
                     GRVNRRDSKAGVSPERAPRLQRLQRQATAFDEGCLPGGSRRGSQPALSPDPPDDCERR
                     TSRRDSLSPDSASRGGRRDSRTHLSPDRSHERDGSPRRHTLRRQSSSAARSPRSPDSN
                     SCCSSRDPSPCSRPQTQTTVEQNQRPAIRRQSTTEEILIARGFRRQSTTEEMIRCRNF
                     RRQSSQSDDVCRYRGRRDSSAQIIDGTIGTMTVETTSTFFDSSTQTEPSPLYDNNHYH
                     EECLRCNSCGLNLTGPNQKRARRFKNQILCDLHFADVALMECSDFMQQLRSFKPQSLG
                     CAVARRKSSTTLIFPLPPQACSDEFCEEYPHNLMPTPGYWIECSRQKITMPTPHTIWD
                     ESDSEHEDIRAGSASDAYLERECSDLYEDDEDSEATPSPRKKTTIEEQWDQQGAFELI
                     SVEQETYEKYFYGTEHWNYFTSDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVHGL
                     IPASCVFADRYNREEVVRSLGKEVNLNPPLTLGQLPDTPEELLKLDQVFIKSELKVGV
                     IFVKEDQYTEEQILDNNENSPLFDEFLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSV
                     YTNWRNIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTRFSPACIKSH
                     FLHTFILVRVSARIKHKPTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKI
                     VNGERASYSAPKFARMQERTRSQMLEDLVMNLSNHAETGQIPKPYRRGSWRPIGEDEY
                     IKMLHARVLDNNTHHEQQQQLLLQQQHMQHTQHMQHLPSHNICCYCNNNATELHTAGA
                     IHNNNDNNNTTTTTTFTHRHNNNNNNYSEQQQQQLPQQQQHDSQQQQQLLQPQQHQLL
                     HQLQLSTSSLTHTSCCAMLHLCARHSHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLN
                     EEPSCLTNAHLFDVVFLVGQSKQKARFIGVRAILGVRSRVFQEMLYGIQTGFGSPQIP
                     VAEIFARPAPSLVSPQNQKPKSNNYLTVPDSDSIRPKSVPSSPMVKRAFSRLGTITAG
                     WGRSIRNKNTNQLNPDDKKKWISSTDYRDSKDKDKDKPGNNQLAVPRLSVCADAQKVD
                     RAKLAQTEFNIIEFDPDTFRVLLDYLHTGTCPLTCVSIPGLLCAAEHYDLPELLQACF
                     HHCKQFLRIEVVCPMLISLENYYWRYTSASELVNMILSFVESKAHSLFKCPEFLHLSE
                     SMVQMIMCRELQTPEIRKFEAMLAWAQHKVGKLKNHPNKDTQFEFECIMERLTRDLNL
                     CRISPSELLTVVLPSKSMKNERIMETLMVQVNLGTYRMPELDAYRQQLRQQESAEATV
                     QVHRAHQNHHNPPPIDARAYAMASLAAALEMQNSSNPLQSNAARDAADEEVELYASFD
                     NAPSTSRVAAQMQAAKEARRKRWAADGASGSSGDGGCASGSSGSGRRY"
     misc_feature    <1173..2171
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="transcriptional regulator ICP4; Provisional;
                     Region: PHA03309"
                     /db_xref="CDD:165564"
     misc_feature    <2301..2423
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; Region: LIM; cd08368"
                     /db_xref="CDD:259829"
     misc_feature    3231..3776
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="Rap/ran-GAP; Region: Rap_GAP; pfam02145"
                     /db_xref="CDD:460463"
     misc_feature    4419..>4586
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; Region:
                     BTB_POZ; cl38908"
                     /db_xref="CDD:453885"
     misc_feature    <4947..5126
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="Broad-Complex, Tramtrack and Bric a brac; Region:
                     BTB; smart00225"
                     /db_xref="CDD:197585"
     misc_feature    5139..5357
                     /gene="rsh"
                     /locus_tag="Dmel_CG44424"
                     /old_locus_tag="Dmel_CG15720"
                     /old_locus_tag="Dmel_CG18646"
                     /old_locus_tag="Dmel_CG42628"
                     /old_locus_tag="Dmel_CG42629"
                     /old_locus_tag="Dmel_CG4346"
                     /gene_synonym="CG15720; CG18646; CG42628; CG42629; CG4346;
                     CG4368; CG44424; Dmel\CG44424; FBpp0073550;
                     R5_X:12971309..12973132; rad; Rad; Rsh"
                     /note="BACK (BTB and C-terminal Kelch) domain; Region:
                     BACK; cl28903"
                     /db_xref="CDD:475122"
ORIGIN      
        1 agatgctgtt caacatccaa gccaaaaggt tgtgtgcctc gcaacagcca cagcgacagc
       61 aacaggagca actgaagcaa cagcaacatc aatcgtttac agttgaacat tcaaatgaag
      121 taatagcaac tgcgaaacgt gcaacaagtc acaggacaat attttttttt caaagtgcca
      181 aatatatatg aagtgcgttt ctgtgtgtca agtttacaat accagagtac catagtattt
      241 attttttttg tgaattgaaa gcaatgcaat agttatccga gcacccccat cgaatcactc
      301 aaattacctg aaagcagcca cggaagtaca acaaatcagg ataccacata cctgatctac
      361 tcatcatacc tataatgtat agcacattaa accattaagc cattcactga ggacctgact
      421 agcaacagac gctttaacta acattgatca aaaaagaaac aactaaaaca aaaagaatac
      481 aaagagaaaa actttgatgc caacaatatt ttaaatgcga aagccaaggg aaaagaaatc
      541 ataagccaac aaggtaacca aaacagagga atcctaactc aatctcaatc gaggccgaag
      601 acaccaaaga agacaaatta agcatgacta tgacagccat ttgctttgtg tgcaacctgc
      661 ccatcatgtc gcaccaagtg ggtttggtgt ggcagggcgg caacggctgg gacgatcttg
      721 tgcgggagca gctggaggag tccaccatac ggcagcggtt gggcggacga cgggactcag
      781 cggcccagat caccacaccg ccgagcacct cgccgccgcc aggattgcag cgccggcggc
      841 gcagctcgct ggcccagctg acggacatcc tgcgggagtg gagcggcggc accaaacagc
      901 agcagcagca ccactcgcag cagcagcaac aacagctgca gcaggcatcc cgctccaagg
      961 cgcagctgaa tcgacgcgaa acgctggcgg atctggcccg cagtctgccg tggcgcacct
     1021 caaccaccac cgatgcgagc acgggtgccg gtggatcggg tggtggtggc tgcaccactt
     1081 acatggcgcc acgcaagcga cgcgaatcat ccgcggactc gggcatccgg agcatgaggt
     1141 cgcgacgaga ctcgaatacc gccgagttcg tcaggcactg gaatcggcgc gaaagcgggg
     1201 cagttgagga gcagcccagc gtctccgtgc ccgtcgtcgt cgagtgctct aaaagcgcat
     1261 cccggcgcgg atccggtgag agctacctgt ccagcagtcg acgcgatagc aatgtggccg
     1321 gtcgggtgac cacgccaccg ccacccggca aataccagat gaccaagaag cgcgactcac
     1381 tggccgcgcc ggaattccca aactttcggc aggagcagcg cccgtccacc agttccgccg
     1441 gctcctgttc ggaccactcc atgcccctga tctcgacgca ttcgagcact caccacctgg
     1501 cccatcagca ggtggactcc gcgtgccaag ccctgccgcc gccaacgatc atcactagct
     1561 ccgtgacgcc accggcaacg agtccgacgg cgccgaaggg tcgccgcgat tcgcagacgc
     1621 agtgcggccg tgtcaatcgg cgggattcca aggcaggcgt cagtccggag cgggcgccac
     1681 gcctacagcg gctgcaacgc caggcgaccg ccttcgacga gggctgcctg ccgggcggca
     1741 gtaggcgtgg ctcccagccc gcactcagtc ccgatccgcc ggacgattgc gagaggcgca
     1801 cctctcgacg ggattccctg tcaccggata gcgcgtcgcg tggcggtcgt cgagattcgc
     1861 gaacgcatct atcgccggat cgatcccacg agcgggatgg tagtccaagg cggcatacac
     1921 tccgcaggca gagcagttcg gcagccagat cgccgagatc gccggactcg aatagctgct
     1981 gctcctcccg ggatccaagt ccctgttcta ggccacaaac gcagaccacc gtcgagcaga
     2041 accagcggcc ggccattcgg aggcagtcca ccaccgagga gatactgatc gccaggggat
     2101 tccgccggca gtcgaccacc gaggagatga tacgctgcag gaacttccgg cgacagagct
     2161 cgcagagcga cgacgtctgt cgttatcgtg gcagacgcga ttcgtcggcg cagataattg
     2221 acggcaccat cggcaccatg accgtggaaa caaccagtac atttttcgac tccagcaccc
     2281 agacagaacc atcgccgctt tatgacaaca atcactatca tgaggagtgc ctgcgctgca
     2341 attcgtgtgg tctgaacttg actgggccca atcaaaaacg ggccaggaga ttcaagaacc
     2401 agatcctgtg cgacctgcat ttcgcggacg tggccctaat ggagtgctcc gatttcatgc
     2461 agcagctgcg gagcttcaag ccgcaatcct tgggctgcgc ggtggccagg cgcaaaagtt
     2521 ccacaacgct gatattcccg ctgccaccgc aggcttgctc agatgagttc tgcgaggagt
     2581 atccgcacaa tctgatgccc actcccggct actggatcga atgctcccgc cagaagatca
     2641 ctatgcccac cccgcacacc atttgggacg agagcgactc ggagcacgag gacattcggg
     2701 caggaagtgc cagcgatgcc tatttggagc gcgagtgcag cgatctgtac gaggatgatg
     2761 aggactctga ggctacgccc agtccgcgca aaaagaccac catcgaggag cagtgggacc
     2821 agcagggcgc attcgaactg atctctgtgg aacaggagac gtacgagaag tacttctatg
     2881 gcaccgagca ctggaactac ttcaccagcg atgaggacct gggtccggtc atcctgtcca
     2941 tcaagcagga gacgctcaac ggacgggatc agttccgcat cctagtacgg gctggttcct
     3001 acacggtgca cggactgata ccggcgtcct gtgtgttcgc agatagatat aatcgcgagg
     3061 aggtagttag atctttaggt aaagaagtta atttaaatcc acctttaacg ttaggacaat
     3121 tacccgatac gccagaggaa ttattaaaat tagatcaggt ttttataaaa tcagagttaa
     3181 aagttggcgt catatttgtc aaagaggatc agtataccga agagcaaatt ctggacaata
     3241 atgaaaattc accgctcttc gacgaattcc tcactcttct gggcgatcga gttcgtctgc
     3301 gcggatttga taaatacaaa ggtggccttg atacggtgca cgacctgaca ggtctcttct
     3361 ccgtctatac gaactggcgc aacatcgaga tcatgttcca tgtgtccacg ttgctgccgt
     3421 acgagaagca cgatccgcag aagcttcaga ggaagcgtca catcggcaac gatatcgtct
     3481 gcgtggtatt cttggaggcg gataacacac gcttcagtcc cgcctgcatc aagagccatt
     3541 tcctgcacac cttcatcctg gttcgcgttt cggccaggat taaacacaag cccacgcgat
     3601 acgaggtgtc cgtggtgacg cgtgacgagg tgggcgccta caagccctat ttgtgggagc
     3661 agtccgtctt cgagaagggg ccgatgttcc gggaatggct gctgaccaag atcgtgaatg
     3721 gagagagagc ctcctattcg gcaccgaaat tcgcgcggat gcaggagcgt acgcgatcgc
     3781 agatgctcga ggatctggtg atgaatctat cgaatcatgc ggaaactgga cagataccga
     3841 agccatatag acgcggcagt tggcgaccga tcggtgagga tgaatatatc aaaatgttgc
     3901 atgcccgtgt cctagacaac aacacacacc acgagcagca gcagcagttg ctgctgcagc
     3961 agcaacacat gcagcacacg cagcacatgc aacacttgcc gtcgcacaac atttgctgct
     4021 attgcaacaa caatgccact gagctgcaca cagcgggtgc aatacacaac aataatgaca
     4081 acaacaacac caccaccacc accacattca cacacagaca caacaacaac aacaataatt
     4141 actctgagca gcagcaacaa caactgccac aacagcagca acatgacagc caacagcaac
     4201 aacaattgct gcagccacaa caacaccaac tgctacacca actgcaattg tcgacgtcgt
     4261 cactcacaca cacgtcgtgc tgtgccatgt tgcacctgtg tgcgaggcat agtcacatgc
     4321 gaccctcgtc accgctgctg gattccgttc gcgatcaatt cgaggactac gatcagttgg
     4381 ccaaggactt tacccgcgta tttctaaacg aagaaccatc gtgcctgacc aacgcccatc
     4441 tcttcgatgt cgtattcctg gtgggtcagt ccaagcaaaa ggctcgattt attggagttc
     4501 gagctattct cggagtacgg agtcgagtct ttcaggaaat gctctatggc attcagaccg
     4561 gcttcggatc gccgcagatt ccggttgcgg aaatctttgc gcgaccagct ccatcgctgg
     4621 tctccccgca aaaccagaaa ccgaagagca acaactatct gaccgttccc gattccgatt
     4681 cgatacgacc gaaaagtgtg ccctcgtcgc cgatggtgaa gagggccttc tcccgactgg
     4741 gaaccattac ggccggatgg ggtcggtcca tacggaacaa gaacaccaac caactgaatc
     4801 cggatgacaa gaagaagtgg atatcgtcga cagattacag ggacagcaag gacaaggaca
     4861 aggacaaacc gggcaataac cagctggccg tgccacgcct ctccgtctgc gccgacgccc
     4921 agaaggtcga tcgcgccaaa ttggcccaaa cggagttcaa catcatcgaa ttcgatccgg
     4981 acacattccg agttctgctc gactacctgc acacgggcac ctgtccgctg acctgcgtct
     5041 ccataccagg gttactatgt gccgcggagc actacgacct gccggagctg ttgcaggcgt
     5101 gcttccatca ctgcaagcag tttctgcgca tcgaggtggt ctgcccgatg ctcatctcgc
     5161 tggagaacta ctactggcgc tacacatccg cctccgagct ggtcaacatg atcctgtcgt
     5221 tcgtggagag caaggcgcac tcgctgttca agtgcccgga gtttctgcac ctatccgaat
     5281 cgatggtgca gatgatcatg tgccgggagt tgcagacgcc cgagatacga aagtttgagg
     5341 caatgctggc gtgggcccaa cacaaggtgg gcaaactgaa aaatcatccg aacaaggaca
     5401 cccagttcga gttcgaatgc attatggagc ggctgacgcg tgatctgaat ctgtgccgga
     5461 tctcgcccag cgaactgctc accgtcgtcc tgccctccaa atcgatgaag aacgaacgca
     5521 tcatggagac gctcatggtg caggtgaatc tggggaccta ccggatgccc gagttggatg
     5581 cgtatcgtca gcagttgcgc cagcaggagt ccgccgaggc caccgtccag gtccaccggg
     5641 cccatcagaa ccaccacaat ccgccaccca tcgatgcccg tgcctatgcc atggcctccc
     5701 tggccgccgc ccttgagatg cagaattcgt cgaatcccct acagtcgaac gccgcccgcg
     5761 atgccgccga cgaggaggtg gagctatatg ccagttttga taatgcaccc agcaccagtc
     5821 gggtggccgc ccaaatgcag gccgccaagg aggcgcgccg gaagcgatgg gcggccgatg
     5881 gggccagcgg gagcagcggg gacggcggat gcgccagcgg gagcagcggc agcgggcggc
     5941 gctactaatt ggatggatgt gttcccgtat gactggtcct aagacttatg gctaacacac
     6001 atagaaattc gccattaact atataagaaa actacaaatt gtgaaaaatt ttttctcagc
     6061 cataaccttt tggaaattgt aatgataatt cggaagaaaa ttttgaaaat atttggataa
     6121 attatataga attgcagtgg cgaatttctt taatttgagc gtactttcat tatgattgtg
     6181 gcgaataatt ctgagcagtg attgcgaaaa taccgatttt atttacaaat aaactcagtt
     6241 aagttcaagg cagttcgcta gattagctat tgcaaaaaaa aaaaacataa tgctttaatt
     6301 caattgtata tgggttattc atacattata aaatgtcgct taaaggtggc ttgatcaatc
     6361 atttttacaa atgccccaaa tttcaagaat tttaagatga agggggtaaa tttctataaa
     6421 aaagttcctt acatttgata aacatatttt ctagttagta attcatagag aatatttcta
     6481 aactcaatgt tcatatctat atacttagat aggctattgg ttttttgggg tatgattgaa
     6541 gcttttaagt atacttttca acactgtgcg aatatgactg gcttgtgtgt gtgtgtgtgc
     6601 atatgtgtgt tttttgtgta tgtgagtggt tttgagtgag tgtgtgagtg gttttgagag
     6661 tgtgtgtgtg tgtgtgcgtc taaccaaccc atcgctcgaa agacgcccga actatccaaa
     6721 tcgaaactga cattgttaac tcttacattc accccggaat gacaagagcc cccaattttt
     6781 tgggggatgc atatagagag agagcggagg gagacggcgg cccaaaaccc accccctccc
     6841 gccccccctc tacaagagat aatgttaaaa gcataagcat tttctacaag tattacccaa
     6901 catacataca tacataaatg tgtacgtcgt gcaaaattgt cctaggaagg tatgtgtaga
     6961 actagtctgt taaggaacca ctgtggcatt cgatttttga tacccacaca gtcgaggata
     7021 aacagaaaaa gaaaaaggat tacaaaaaaa aaaagtgcag caaggaaaaa cattcgcaaa
     7081 aaaaagggaa aaaacaagaa aaggaaataa aaacaaacgc ttactgatgt aaaacaaaga
     7141 cttaaaacta aaacaaaaaa aacaaacatg aaaccaaatg aataaaatat aaaacaaatt
     7201 tttttaatca atgttattgg acaaatgtaa gctgaacaaa aagatcctct ctagccccga
     7261 cccattccca tttccattcc cattgtaaga cattttccag ttccctcgat atagaacgag
     7321 ttaccccaga agaactcaat ttacgaccta agaaattact atatgatgta cttaaatgtt
     7381 caaaagaatt gcaagcataa tcttaactgt ttgaacgctt tttttttggg ttttttgtat
     7441 tgtctgttaa tttgttacta ccaaaagaca aggaagcata ttatagataa gtatcaacat
     7501 ttccagtcaa gttggctgca cacctgtaca tttaatactg gttaatatag ttatgctaaa
     7561 ccgtaaaatc aacacaacac ttgcagaact gcaagtgaag cgagagtcca gagaaccaga
     7621 aaaccgattc ataagtgcaa tatctaagtg tatgtttgta taaccaataa attaacttga
     7681 tctaagagaa cgagcaggtg taaatcccca aaaacagtca ctgcttttat gaataaaaaa
     7741 aatcccggaa gatcagccct aaagataaat tcaactaaag gccaaaacca ccattaaaaa
     7801 ataaaattga atgattgaaa aaaacctaat attaccaact aaataatttg tcagcataga
     7861 gctcattgaa gaaaaacgac aagaaccctg cagatcatag agtcatcaag agtagtgaac
     7921 agataagccc atagaaaatc gttttccaca ttccctttgg aaatcagttg acccaacttt
     7981 tgaccagtac catttctcgg atagatttac ttttctaaca ccaccattca cttatgaaat
     8041 attttcctac tggaattctt cagttgctaa aatgacctag tttcggtcaa taaactaaag
     8101 atggcaaatt ctgatgcaac atgaaaacta aatgtaaacg gcagcatttc caaaagggtt
     8161 tcacttaaat gttcaaagac gcatatatca aaattcaatg tctaactgta caaccaagtt
     8221 tatcaagtgt ctggcaggtc atacatatgt aagcatataa ttaagcaatt acagtatata
     8281 tataaaaaaa aaaaagaaaa acaaggccag aagaaaaaga accctaacaa gaaaggcaaa
     8341 cggaaatcaa taactaaacg ctttcagtgt gcaataaccg aataactaac attaacgtct
     8401 aataaccaga taaacgaaca gataaactgt aagccaaaag ctaaaactgg aaaataatga
     8461 atttggaaaa ctgtagcagg caaacgtttt tggggcctgt ttcttatttt tttttttttt
     8521 tttttgtgga aaacttggat tgcaacagaa acgagcagtt ataatgaaaa aaaaagaaaa
     8581 aaataggtaa aaacaaaaac aacactcttc gaagcatttt gagacagaga aggccgagtg
     8641 ccattcaatt caaaagttag ttatacaaat gttgtacgtt tttttgttga ctaatctttg
     8701 aaaacattga aaagagaaaa aaatagcaac agatttaaat ggacataaag catagctgta
     8761 tttttaccgt cgctctatcg actcaaatat actgtttgaa ctgaatgtac tcatctgatt
     8821 aatatgaatg tatttaccgc agatatccga tataccgaaa ataaacaata agcgctgttt
     8881 ctatatgttc gccccgatcg ccaccgccca ccgcccatcg cccctctgcc taaattaacc
     8941 cacccaacca ccggatggca gagtggtggt gcgcagggtg gtgcgaaacg ggctcacttt
     9001 tttgatagca gattgaatca ggcaggcaat cgaaaaacaa aatttaaaaa aaaatgaaaa
     9061 aaacacccgt gactcctttt gagctgacga tctacatcta caatatacgc aaatgaaaac
     9121 cacataagac atttgtttaa tcgaaaaaga aaaaaacgca tttgaatgcg gagtaaagct
     9181 aaataaatgt tgtaattgcc acagccaagc ataacaggag