Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_001298166 2199 bp mRNA linear INV 26-DEC-2023 D (CG1637), mRNA. ACCESSION NM_001298166 VERSION NM_001298166.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2199) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2199) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2199) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2199) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2199) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2199) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2199) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2199) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2199) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2199) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2199) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2199) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2199) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2199) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2199) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2199) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2199) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2199) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2199 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2199 /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /map="9F5-9F7" /db_xref="FLYBASE:FBgn0030245" /db_xref="GeneID:32019" CDS 246..1625 /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /EC_number="3.-.-.-" /EC_number="3.1.3.2" /note="CG1637 gene product from transcript CG1637-RD; CG1637-PD" /codon_start=1 /product="uncharacterized protein, isoform D" /protein_id="NP_001285095.1" /db_xref="FLYBASE:FBpp0308868" /db_xref="GeneID:32019" /db_xref="FLYBASE:FBgn0030245" /translation="MQRLQFALLASLLLLVLLLPGIRSTPIDQDVDIVHYQPEQVHLS FGAERTDSEIVVTWSTRSLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKFVDGG HKQATQFIHRVTLRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWSPSLAIYGDM GNENAQSLARLQQETQRGMYDAIIHVGDFAYDMNTKNARVGDEFMRQIETVAAYLPYM VVPGNHEEKFNFSNYRARFSMPGGTENMFYSFDLGPVHFVGISTEVYYFLNYGLKPLV FQFEWLREDLAKANLPENRNKRPWIILYGHRPMYCSNENDNDCTHSETLTRVGWPFVH MFGLEPLLYEFGVDVAIWAHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGS AGCKEGREPFKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFEQVSDDKNGAIIDDFWLV KSKHGSYRN" misc_feature 357..671 /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="Purple acid Phosphatase, N-terminal domain; Region: Pur_ac_phosph_N; pfam16656" /db_xref="CDD:465220" misc_feature 690..1598 /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain; Region: MPP_PAPs; cd00839" /db_xref="CDD:277318" misc_feature order(690..692,933..941,945..950,954..956,966..980, 1038..1040,1044..1046,1065..1067,1104..1112,1125..1130, 1164..1166,1209..1217) /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="homotrimer interface [polypeptide binding]; other site" /db_xref="CDD:277318" misc_feature order(720..722,807..809,816..818,912..917,1161..1163, 1305..1307,1311..1313) /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="active site" /db_xref="CDD:277318" misc_feature order(720..722,807..809,816..818,912..914,1161..1163, 1305..1307,1311..1313) /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277318" misc_feature order(921..923,927..929,948..950,954..956,972..974, 1032..1040,1065..1067,1203..1208,1212..1217,1251..1256, 1470..1472) /gene="CG1637" /locus_tag="Dmel_CG1637" /gene_synonym="Dmel\CG1637" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277318" ORIGIN 1 ccaaggtcac actgcacccg gattgttttt gttgtggctg cgcttataaa ttgctggata 61 tttccatatt agtgctcatt ttttgttgtt cccgcaagcg aatttgtcga ttcccccgtt 121 taactccaac gactccccga gccaagtgtc cccactttga caacgacgca attgtgattt 181 ggcaatgttt ttgctgactg cgttactgtg caacaacaaa cacaagtaaa tacaaaacgg 241 taaaaatgca gagactgcaa ttcgctctgc tagcgtcgct gctcctgctg gtgctgcttc 301 ttccggggat taggagcact cccatcgacc aggacgtcga cattgttcac tatcagccgg 361 agcaagtgca tctgtccttt ggagcagaac gcaccgatag cgagatagtc gtcacttggt 421 ccacgcgcag cctgccgccg gatcaggaag tgggtgcggt cagcgtggtg gagtacggtc 481 aactggtaga cggacaggtc aggctcaccc aacaggcccg gggaaaggct actaaattcg 541 tggacggcgg tcacaagcag gccacgcagt tcatccacag ggtgacgctt agggacctgg 601 agccaaatgc cacatactct taccattgcg gtagcgattt tggctggtcg gccatcttcc 661 agtttcgcac agtgccctcg gcatccgttg actggtcgcc atcgctggct atctacgggg 721 atatgggcaa tgagaatgcc caatccctgg cccgattgca gcaggagacg cagcgcggca 781 tgtacgatgc catcatccat gtgggtgact tcgcctacga catgaacacg aagaatgctc 841 gcgtggggga tgagtttatg cggcagatcg aaacggtggc tgcctacctg ccatacatgg 901 tggttcccgg caatcacgag gagaagttca acttctcgaa ctatcgtgcc cgcttcagta 961 tgccgggagg tacggagaac atgttctaca gcttcgatct gggacccgtg cacttcgtgg 1021 gcattagcac ggaggtctac tactttctca actatggttt aaagccgctg gtattccagt 1081 tcgaatggtt gcgtgaggat ctggccaagg ccaatctgcc agagaatcgg aacaagcgtc 1141 cgtggatcat cttgtacggt catcgaccca tgtactgcag caacgagaac gacaatgact 1201 gcacccactc agagactctc acgcgggtgg gctggccatt tgtacacatg ttcggattgg 1261 agccgctgct ttacgagttc ggcgtggacg tggccatttg ggcgcacgag cactcctacg 1321 agagactctg gcccatttac gattacaagg tgcgcaatgg aacgctgaag gattcgccgt 1381 acaatgatcc tagtgcccct gtgcacatcg tcacaggatc cgccggctgc aaggagggaa 1441 gagaaccatt caagggcaaa atacccgaat ggagcgcttt tcacagccag gactatggtt 1501 acacacggct caaggctcac aatcgaacac atatccattt cgagcaggtg tccgacgaca 1561 agaacggcgc catcatcgat gacttttggt tggtgaaatc caagcatgga agctaccgaa 1621 actaaatagt cattcccaat ctgaaccata acctgagccg aatcaattca agctaaagga 1681 gtctctcgag gcattacacg catcaatagc aacaggcagt attagtagcg cacattcgcc 1741 tcgacctgat tcgatcacaa actatagcaa taagcgtggc acattcctta tccaaatatc 1801 tcaacccagc ccgaaacaaa ctacagtttt atacttagcc aatttaacaa acgcagcatt 1861 tacacatatg caagcgcttt taagtgtgca tttaacataa gctgataaga acgtaaatga 1921 acttagtttc ttatctctgt cgcatgttac ttgatgttca aaaactggta ctcggtaact 1981 gctgtcttaa gcaaattgtt tttaatgtgt atgggatgta cttgatatac ttattaggat 2041 caatgttaaa ggactaatgg atatgcaccc gatcggtttt tattatcaat aagtacatga 2101 aatccgatta ccgggtttat tatagtcacg gcaatccgat tgtacactga ttgttgttta 2161 aatgcctagt atctttacaa taaatgtctt gaacttttc