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LOCUS NM_001298102 2984 bp mRNA linear INV 26-DEC-2023 C (CG15365), mRNA. ACCESSION NM_001298102 VERSION NM_001298102.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2984) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2984) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2984) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2984) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2984) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2984) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2984) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2984) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2984) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2984) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2984) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2984) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2984) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2984) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2984) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2984) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2984) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2984) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2984 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2984 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /map="8C4-8C4" /db_xref="FLYBASE:FBgn0030077" /db_xref="GeneID:31829" CDS 170..2635 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /note="CG15365 gene product from transcript CG15365-RC; CG15365-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_001285031.1" /db_xref="FLYBASE:FBpp0308737" /db_xref="GeneID:31829" /db_xref="FLYBASE:FBgn0030077" /translation="MSAATHMAMPAHAVVPPPGTPPVLGGSGCSNLSLPSGKRGHKRS VSLENNAPLALRSTPSMGQSSLGSPLLQFGQAAPGQGHSQGFHTGTLKSRQEQRRLSQ KFGSHSNLDDEGVGIGVGMGMGMGLQMRSKFQNIRQMFELSRSCVGGGGGDGRGGAAE EEAMQSLPATLPQQHQQQQQRRTTPIAGGSRHQQQQQMGEAEQTSGNFLRPIAFKPIP FEPDYRIACQQQQQHQQQLQLQQQQQQQQQQQQQQQLQLQHQQQQQHQQQHQHQHQQQ HQSLQLPTEGGQAGGVAAERYGYGSTPSLAPLPTASAQKFGSTTDLRHLAARRRNHRL LQRCSNEDALTLDLLSTGSHDRPDGASSKSSGTVVGSSDLTPSPSDSGISELEAALKD RDSELSYLRQAMEHNEKDKEVYWEHETQRLRLFYEGQQRECQLKLRKMEQLLGLQQFQ LKQHKLRQSEQVNRLQQQLDLARDSSQGLQQQVDALRHQLEDSEWRVCERNGEIALLK TQLKEAHLEINMKDHAIVSLKHSSNRSSSSSNSNSNKSCDTNTSQSQPKQQAKEEQQQ QQHPELQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLKQQHQPDQQQLQKI ITLKDQVIGALTSELAKLRKELSDLAIAHEYGEEPCGRYTRLKQQLDNLNEICQKTRK YTTTSASPTAVASPAAQVAPPAPSPAAHVATPSCAQELPKLDVLVQRLQLDQGQGTQQ TLDTLIEESTTYAEDIAKLRQKLDDFRLNLELEKRQWSAEKDKVLGYQKQLQAHYIQM YQKLRCLDSAGAAVGQVEATSGN" misc_feature <2351..2584 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /note="Region: Fez1; pfam06818" /db_xref="CDD:462015" ORIGIN 1 gttgttggcg gtttcggttt cggttttggt tttggttttt gcctttggat tttggttacg 61 gatggcggtc ttcgatttgg acaatggctt cgggatggca acttgcccct tgcaacgcac 121 attactcata cgccgcgtgg ccatgatcag ggatctcttc gggatcagga tgtcggctgc 181 cacgcacatg gcaatgccgg ctcacgccgt cgtcccgccg cccggcacac cgccggtgct 241 ggggggcagt gggtgctcca atcttagcct gccgtcgggc aagcgtggcc acaagcgcag 301 cgtttcgctg gagaataatg caccactggc actgcgcagc acacctagca tgggtcaatc 361 ctcgctgggc tcgccgctgc tgcaatttgg ccaggctgcg cctgggcaag gacactcgca 421 gggctttcac acgggcacat tgaagtcgcg ccaggagcag cgtcgtctga gccaaaagtt 481 cgggagtcac agcaacttgg atgatgaggg tgtgggcatt ggcgtgggca tgggcatggg 541 catgggcctg cagatgcgca gcaagttcca gaatatacga caaatgttcg agctgagtcg 601 cagttgtgtg ggcggcgggg gcggcgatgg cagagggggc gcggccgagg aggaggcaat 661 gcaatctctg ccagcaacat tgccgcagca acatcagcag cagcagcaga ggcgcaccac 721 gcccattgcc ggcggaagtc gccaccagca acagcaacaa atgggcgagg cggaacagac 781 cagcggcaac tttctgcgac ccattgcctt caagcccatt ccatttgagc cggactaccg 841 catcgcctgc cagcagcagc agcagcatca gcagcaactg cagttgcaac aacagcagca 901 acagcagcag cagcagcagc agcagcaaca gttgcagctg caacaccaac agcagcagca 961 gcatcaacag caacatcaac atcaacatca acaacaacat cagtcgctgc agctgccgac 1021 ggagggcggg caggcggggg gcgtggcggc cgagcggtac ggctacggat cgacgccgtc 1081 acttgcccca ctgcccaccg catcggccca gaaatttggc agtaccactg acctacgaca 1141 cttggccgct cgacgacgaa atcatcgcct gctgcagcgt tgcagtaacg aggacgccct 1201 gacccttgac ctcttgagca cgggcagcca cgacagaccc gatggtgcca gcagcaagag 1261 cagcggcact gtggtgggca gcagcgactt gacgccctcg ccgtcggatt ctgggatctc 1321 ggaactggag gcggcgctga aggatcgcga ttcggagctc tcgtacctgc gacaggccat 1381 ggagcacaat gagaaagaca aggaggtgta ctgggagcac gagacgcagc gtttgcggct 1441 cttctacgag ggtcagcagc gggagtgtca actgaagctg cgcaagatgg agcagctact 1501 cggactgcag cagttccagc tgaagcagca caagctgcgc caatcggagc aggtcaatcg 1561 gctgcagcag cagctcgatt tggccagaga ctccagccag gggctgcaac agcaggtgga 1621 cgcactgcgt caccagctgg aggacagcga gtggcgcgtc tgcgagcgca acggggagat 1681 agctttactc aagacgcagc tcaaggaggc gcatctggaa atcaacatga aggatcatgc 1741 gattgtcagc ctgaagcaca gcagcaacag gagcagcagc agcagcaaca gcaacagcaa 1801 caagtcctgt gacacaaaca caagccaaag tcaaccaaag cagcaggcga aagaggagca 1861 gcagcagcaa cagcatccag agttgcagca acagcaacag cagcagcaac agcaacagca 1921 acagcaacag caacagcaac agcaacagca acagcaacag caacagcaac aacagcagca 1981 acagcagcaa cagcaactca agcaacaaca tcagcccgac cagcagcaac tgcagaagat 2041 catcacgctg aaggatcagg tgattggagc tctgaccagc gagctggcca agttgcgcaa 2101 ggagctctcc gatctggcca ttgcccacga gtacggcgag gagccctgcg gccgatacac 2161 tcgtctcaag cagcagctgg acaatctaaa cgagatttgc cagaagacac gaaagtacac 2221 aacaacatcc gcatcaccaa cagcagtagc atcgccagca gcacaagtgg caccaccagc 2281 accatcgccg gcagcacacg tagcaacacc aagctgtgcc caggagctgc ccaagttgga 2341 tgtgctggtg cagcgattgc aattggacca gggacagggt acgcagcaaa cgctggacac 2401 gctcatcgag gagtccacca cgtatgcgga ggatatagcc aagctgcgcc agaaactgga 2461 cgactttcgt ctgaatctcg agctggagaa gcgtcagtgg agcgccgaga aggacaaagt 2521 gctgggctac cagaagcagt tgcaggccca ctatattcaa atgtaccaga agctgcgctg 2581 cctggatagc gctggagcag cagttggcca agtggaggcc accagtggta actgagcgga 2641 gctgaaaagt gcaggcgcaa tggtgctatc atcgctgggt taacaaactt aggaagcaag 2701 tggaagactt tcttccttac aactgatcaa tatataatgt ttttaaaata tataaacata 2761 tctgaatact atttatatag gcaaaatgta aatgtacttt tgctataaaa atcgattctt 2821 tagattgtct gctattattc ttaatggtaa cttttattaa aaataaaagt tgatggcact 2881 caaaaccagt gagttgaaac attttccttc cctcggcgat aaataataca cgattttcga 2941 tattactaga gttgatgtac acagaaactc tgatgaatat ttat