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LOCUS NM_001298101 3331 bp mRNA linear INV 26-DEC-2023 B (CG15365), mRNA. ACCESSION NM_001298101 VERSION NM_001298101.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3331) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3331) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3331) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3331) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3331) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3331) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3331) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3331) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3331) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3331) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3331) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3331) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3331) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3331) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3331) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3331) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3331) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3331) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3331 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3331 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /map="8C4-8C4" /db_xref="FLYBASE:FBgn0030077" /db_xref="GeneID:31829" CDS 496..2982 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /note="CG15365 gene product from transcript CG15365-RB; CG15365-PB" /codon_start=1 /product="uncharacterized protein, isoform B" /protein_id="NP_001285030.1" /db_xref="FLYBASE:FBpp0308736" /db_xref="GeneID:31829" /db_xref="FLYBASE:FBgn0030077" /translation="MSAATHMAMPAHAVVPPPGTPPVLGGSGCSNLSLPSGKRGHKRS VSLENNAPLALRSTPSMGQSSLGSPLLQFGQAAPGQGHSQGFHTGTLKSRQEQRRLSQ KFGSHSNLDDEGVGIGVGMGMGMGLQMRSKFQNIRQMFELSRSCVGGGGGDGRGGAAE EEAMQSLPATLPQQHQQQQQRRTTPIAGGSRHQQQQQMGEAEQTSGNFLRPIAFKPIP FEPDYRIACQQQQQHQQQLQLQQQQQQQQQQQQQQQLQLQHQQQQQHQQQHQHQHQQQ HQSLQLPTEGGQAGGVAAERYGYGSTPSLAPLPTASAQKFGSTTDLRHLAARRRNHRL LQRCSNEDALTLDLLSTGSHDRPDGASSKSSGTVVGSSDLTPSPSDSGISELEAALKD RDSELSYLRQAMEHNEKVIFQVQKDKEVYWEHETQRLRLFYEGQQRECQLKLRKMEQL LGLQQFQLKQHKLRQSEQVNRLQQQLDLARDSSQGLQQQVDALRHQLEDSEWRVCERN GEIALLKTQLKEAHLEINMKDHAIVSLKHSSNRSSSSSNSNSNKSCDTNTSQSQPKQQ AKEEQQQQQHPELQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLKQQHQPD QQQLQKIITLKDQVIGALTSELAKLRKELSDLAIAHEYGEEPCGRYTRLKQQLDNLNE ICQKTRKYTTTSASPTAVASPAAQVAPPAPSPAAHVATPSCAQELPKLDVLVQRLQLD QGQGTQQTLDTLIEESTTYAEDIAKLRQKLDDFRLNLELEKRQWSAEKDKVLGYQKQL QAHYIQMYQKLRCLDSAGAAVGQVEATSGN" misc_feature <2698..2931 /gene="CG15365" /locus_tag="Dmel_CG15365" /gene_synonym="Dmel\CG15365" /note="Region: Fez1; pfam06818" /db_xref="CDD:462015" ORIGIN 1 agtttgcttt gagcgctgga acgcgaaagt cgtcgacgga gggccaacgt tgcggatgaa 61 agtttcgaag cgaactggga agatttttga aaagcgcagg cgtgcaacgg tttttttttt 121 ttagtttttc tttttttttt ttgggggggt ttgggctacg cttcgcggcg agcggtgaat 181 ggcagccttt ttttcgagtg tggtggctga gtgcaattca aaacgcattt cgtgcataat 241 ttgtggaatt ttacgcgttg taaaatcaat ttcattgtgc aaatttgaaa acttgcctgc 301 tttccgttgg ctttcagcgg caacagctga aatataatgc agccacatca agcgggcaag 361 caataaacaa atatcaaaaa aaaaaaaaaa accaagaaaa tttacaaaat ataaaaacac 421 acacatttga agagtcaaca acagcgatta caaggcacta aaaaccaaag gaagagggat 481 ctcttcggga tcaggatgtc ggctgccacg cacatggcaa tgccggctca cgccgtcgtc 541 ccgccgcccg gcacaccgcc ggtgctgggg ggcagtgggt gctccaatct tagcctgccg 601 tcgggcaagc gtggccacaa gcgcagcgtt tcgctggaga ataatgcacc actggcactg 661 cgcagcacac ctagcatggg tcaatcctcg ctgggctcgc cgctgctgca atttggccag 721 gctgcgcctg ggcaaggaca ctcgcagggc tttcacacgg gcacattgaa gtcgcgccag 781 gagcagcgtc gtctgagcca aaagttcggg agtcacagca acttggatga tgagggtgtg 841 ggcattggcg tgggcatggg catgggcatg ggcctgcaga tgcgcagcaa gttccagaat 901 atacgacaaa tgttcgagct gagtcgcagt tgtgtgggcg gcgggggcgg cgatggcaga 961 gggggcgcgg ccgaggagga ggcaatgcaa tctctgccag caacattgcc gcagcaacat 1021 cagcagcagc agcagaggcg caccacgccc attgccggcg gaagtcgcca ccagcaacag 1081 caacaaatgg gcgaggcgga acagaccagc ggcaactttc tgcgacccat tgccttcaag 1141 cccattccat ttgagccgga ctaccgcatc gcctgccagc agcagcagca gcatcagcag 1201 caactgcagt tgcaacaaca gcagcaacag cagcagcagc agcagcagca gcaacagttg 1261 cagctgcaac accaacagca gcagcagcat caacagcaac atcaacatca acatcaacaa 1321 caacatcagt cgctgcagct gccgacggag ggcgggcagg cggggggcgt ggcggccgag 1381 cggtacggct acggatcgac gccgtcactt gccccactgc ccaccgcatc ggcccagaaa 1441 tttggcagta ccactgacct acgacacttg gccgctcgac gacgaaatca tcgcctgctg 1501 cagcgttgca gtaacgagga cgccctgacc cttgacctct tgagcacggg cagccacgac 1561 agacccgatg gtgccagcag caagagcagc ggcactgtgg tgggcagcag cgacttgacg 1621 ccctcgccgt cggattctgg gatctcggaa ctggaggcgg cgctgaagga tcgcgattcg 1681 gagctctcgt acctgcgaca ggccatggag cacaatgaga aagtaatttt ccaagttcaa 1741 aaggacaagg aggtgtactg ggagcacgag acgcagcgtt tgcggctctt ctacgagggt 1801 cagcagcggg agtgtcaact gaagctgcgc aagatggagc agctactcgg actgcagcag 1861 ttccagctga agcagcacaa gctgcgccaa tcggagcagg tcaatcggct gcagcagcag 1921 ctcgatttgg ccagagactc cagccagggg ctgcaacagc aggtggacgc actgcgtcac 1981 cagctggagg acagcgagtg gcgcgtctgc gagcgcaacg gggagatagc tttactcaag 2041 acgcagctca aggaggcgca tctggaaatc aacatgaagg atcatgcgat tgtcagcctg 2101 aagcacagca gcaacaggag cagcagcagc agcaacagca acagcaacaa gtcctgtgac 2161 acaaacacaa gccaaagtca accaaagcag caggcgaaag aggagcagca gcagcaacag 2221 catccagagt tgcagcaaca gcaacagcag cagcaacagc aacagcaaca gcaacagcaa 2281 cagcaacagc aacagcaaca gcaacagcaa cagcaacaac agcagcaaca gcagcaacag 2341 caactcaagc aacaacatca gcccgaccag cagcaactgc agaagatcat cacgctgaag 2401 gatcaggtga ttggagctct gaccagcgag ctggccaagt tgcgcaagga gctctccgat 2461 ctggccattg cccacgagta cggcgaggag ccctgcggcc gatacactcg tctcaagcag 2521 cagctggaca atctaaacga gatttgccag aagacacgaa agtacacaac aacatccgca 2581 tcaccaacag cagtagcatc gccagcagca caagtggcac caccagcacc atcgccggca 2641 gcacacgtag caacaccaag ctgtgcccag gagctgccca agttggatgt gctggtgcag 2701 cgattgcaat tggaccaggg acagggtacg cagcaaacgc tggacacgct catcgaggag 2761 tccaccacgt atgcggagga tatagccaag ctgcgccaga aactggacga ctttcgtctg 2821 aatctcgagc tggagaagcg tcagtggagc gccgagaagg acaaagtgct gggctaccag 2881 aagcagttgc aggcccacta tattcaaatg taccagaagc tgcgctgcct ggatagcgct 2941 ggagcagcag ttggccaagt ggaggccacc agtggtaact gagcggagct gaaaagtgca 3001 ggcgcaatgg tgctatcatc gctgggttaa caaacttagg aagcaagtgg aagactttct 3061 tccttacaac tgatcaatat ataatgtttt taaaatatat aaacatatct gaatactatt 3121 tatataggca aaatgtaaat gtacttttgc tataaaaatc gattctttag attgtctgct 3181 attattctta atggtaactt ttattaaaaa taaaagttga tggcactcaa aaccagtgag 3241 ttgaaacatt ttccttccct cggcgataaa taatacacga ttttcgatat tactagagtt 3301 gatgtacaca gaaactctga tgaatattta t