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LOCUS NM_001298042 2425 bp mRNA linear INV 26-DEC-2023 K (CG43736), mRNA. ACCESSION NM_001298042 VERSION NM_001298042.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2425) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2425) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2425) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2425) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2425) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2425) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2425) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2425) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2425) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2425) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2425) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2425) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2425) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2425) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2425) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2425) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2425 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2425 /gene="CG43736" /locus_tag="Dmel_CG43736" /old_locus_tag="Dmel_CG33691" /old_locus_tag="Dmel_CG33692" /gene_synonym="CG14433; CG32737; CG32737 ORF A; CG32737-ORFA; CG32737-ORFB; CG33691; CG33692; CG4564; CG4571; Dmel\CG43736" /map="6E1-6E2" /db_xref="FLYBASE:FBgn0263993" /db_xref="GeneID:3771905" CDS 359..2221 /gene="CG43736" /locus_tag="Dmel_CG43736" /old_locus_tag="Dmel_CG33691" /old_locus_tag="Dmel_CG33692" /gene_synonym="CG14433; CG32737; CG32737 ORF A; CG32737-ORFA; CG32737-ORFB; CG33691; CG33692; CG4564; CG4571; Dmel\CG43736" /note="CG43736 gene product from transcript CG43736-RK; CG43736-PK" /codon_start=1 /product="uncharacterized protein, isoform K" /protein_id="NP_001284971.1" /db_xref="FLYBASE:FBpp0311821" /db_xref="GeneID:3771905" /db_xref="FLYBASE:FBgn0263993" /translation="MASEDVQITSVIDANGQSLPLHGNSLGGPLGPPVKQERPDDAEI RELAAKMKEQQKQQAAQQASRQAAMQHSNGGAIAASSAGGNMQPPITNGNGQTNIMNY LSRHQKLPNGTMQVVPALASNGRSNGAVSDSGSDKKSSTGPCDEESIQGHFGWAQFGK VSIPYIYRQSEKYCSVRMIELKLLGKYLNCLHPDIYSSCTCVRSYYITDAEARLFIEI NHKHCDGEFGRDIFNQKDLVVRLSDASKFYQFLDICYRKLVSGSKTPSEKCGFIRINK ESVVPYTVRNNQQVVPLFYFEGETENLKTKAELLNGWDLAYLKFCCKVQGIRNELFSS ENVAVISLTDIKSYFPNGTEFEDYWPSKVVDSNLLIGNRANVNNSVNWTRQPSAPPPK VTTSVSGSSGPSSSSGGNMGQNTSAASSSANTAGGQQVTSKSQQQHAASAAAAAATAH QQHLMKQRAAAAAAAAGANGVANAANSFGAAAVAAFNSQAAAAASMLQQSQGNNRMLS QATVQALASSGWMSGQTNLQLHAQMMAQQTHANANRVGSYREHMNNLMMSGSSRQPYS YNNPAISMSSVNNHSGGGGNAPPPLVRSAAGQNANHISRAQRPRQSQYRCLRYV" ORIGIN 1 gtgtaagcca tgtgcagaga gatcgaagcc gaagggagac cagtgaggac attggagaag 61 gagcaatatc aattacaacg gggaaggggg accaggtggt cctgcgtccg gagttgccaa 121 ctgtcaccga aggacacggc gaagaggaga ccgagaaaag tgttgaggat gagaagggaa 181 gcggaggagc aggagcagga gcagaagcag tagatgcgat agagaagagc tcctaatata 241 aaaccaaacc aaaagtgtgg atatcgaaaa gtctggaaaa gtacgataac gcaagattac 301 atagagcgcg agcaagacag cattctagag caaaagagcg agagtgtgcg gaggagcgat 361 ggccagcgag gatgtgcaga tcactagcgt catcgatgcc aatggccaga gcctaccgct 421 ccacggcaac agtttgggcg gtcccctggg accgcccgtc aagcaggagc gtcccgatga 481 cgccgagatc cgcgaactag ctgccaaaat gaaggagcag cagaagcaac aggccgccca 541 gcaggcatcc cgtcaagcgg ccatgcagca ctcgaatggg ggcgccattg cggcatcctc 601 ggccggtggc aacatgcagc cgccgatcac aaatggcaat ggccagacca atatcatgaa 661 ctacctatct cgtcatcaga aactacccaa cggcaccatg caggtggtgc ccgccttggc 721 ctccaatggc cgctcgaatg gagccgtcag cgactccggc tcggacaaga agtcctccac 781 gggaccctgc gacgaggagt ccattcaagg ccacttcggc tgggctcagt tcggcaaggt 841 atccataccg tacatctatc gccaatcgga gaagtactgc tccgtgcgca tgatcgaact 901 gaaactgctg ggcaaatacc ttaactgcct gcatccggat atctactcca gctgcacctg 961 cgtgcgcagc tactacatca ccgatgcgga ggcccgtctc ttcatcgaga ttaatcataa 1021 gcattgtgac ggcgagttcg gtcgcgacat cttcaaccaa aaggatttgg tggtgcgtct 1081 cagtgacgca tccaagttct atcagttcct ggatatttgc tataggaaac tagtctccgg 1141 cagcaagacg ccgtcggaga agtgcggctt tattcgcatc aacaaggagt ccgtggtgcc 1201 ctacactgtg cgcaacaatc agcaggttgt gccgctcttt tattttgagg gcgagaccga 1261 gaatctaaag accaaagcgg agctgctcaa tggctgggac ctggcttatc taaagttctg 1321 ctgcaaggtg cagggcatac gcaatgagct cttctccagc gagaacgtgg ccgtgatttc 1381 gctgacggac atcaaaagct acttcccaaa tggcaccgaa ttcgaggact actggcccag 1441 caaggtggtt gactccaatc tgctcattgg caatcgggcc aatgtcaaca actcggtcaa 1501 ttggacccgt caaccctcgg cgccgcctcc aaaagtgacc acctccgttt ccggatcgtc 1561 cggcccttcc tcctccagcg gcggcaacat gggccagaac acatcagccg catcatcctc 1621 cgcgaacacc gctggtggcc aacaggtgac ctcaaaatct cagcaacagc acgctgcctc 1681 tgccgccgca gcagcggcga cggcgcatca acagcatctg atgaagcaac gcgccgccgc 1741 agcagcagct gccgccggcg ccaatggtgt ggcgaatgcg gcaaatagtt ttggggcagc 1801 cgcggtagcg gccttcaatt cccaggcggc ggcagcggcg tcgatgctcc agcagtcgca 1861 gggcaacaac aggatgttat cgcaggccac cgtccaggct ttggccagca gcggatggat 1921 gtccggacag acaaacctgc agctccacgc ccagatgatg gcgcagcaaa cgcatgcgaa 1981 cgccaatcgc gtgggaagct atcgggagca catgaacaac ctgatgatga gcggcagcag 2041 ccggcagccg tattcctaca acaaccccgc gatctccatg tcctcggtga acaaccatag 2101 tggtggcggc gggaatgccc cacctccgct cgtccgctcg gcggcaggtc aaaatgccaa 2161 ccacatcagt cgagcgcaaa ggccaaggca atcgcaatat cgatgtctcc gatatgttta 2221 atcggcaatg caagttgcaa gtgtgcggat acagaagatg atgagaagaa gaagagtgag 2281 ggtgagagca agagagagaa agaaacccgc caacgagaaa tcaagaaatt cataaaatca 2341 ttgaaaatgc ataccaaaca aatgacattt cccagtgtct ttagtcttta gttagttgat 2401 gagaaatgac aattacaaca aaatc