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LOCUS NM_001298026 2983 bp mRNA linear INV 26-DEC-2023 D (CG14442), mRNA. ACCESSION NM_001298026 VERSION NM_001298026.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2983) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2983) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2983) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2983) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2983) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2983) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2983) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2983) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2983) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2983) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2983) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2983) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2983) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2983) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2983) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2983) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2983) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2983) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2983 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2983 /gene="CG14442" /locus_tag="Dmel_CG14442" /gene_synonym="Dmel\CG14442" /map="6C6-6C7" /db_xref="FLYBASE:FBgn0029893" /db_xref="GeneID:31609" CDS 1052..2641 /gene="CG14442" /locus_tag="Dmel_CG14442" /gene_synonym="Dmel\CG14442" /note="CG14442 gene product from transcript CG14442-RD; CG14442-PD" /codon_start=1 /product="uncharacterized protein, isoform D" /protein_id="NP_001284955.1" /db_xref="FLYBASE:FBpp0308576" /db_xref="GeneID:31609" /db_xref="FLYBASE:FBgn0029893" /translation="MEPDPNGIKIEPSLDQQQYATHVLAINGSNARLLIEHPSALLVP LSSHHQLQLQQQQQQQQHVQQQHQQQQQQHQQQQQQFQQQHLHQQQQDQLQFQQQHLQ LYAPLKQQQLQQQQSQQPPTPLGPTSSASSASITGASTTGHQQRWNESPEARQRRLAR NAERMRERRQRESEEEYRKRLLRNAEANRQRRQNESDIERAMRLVRNAARQRLRRAME SPDQRAKRLAKLAERMRMYRASETNDQRKLRLAEMAARARQRIANESPEERKERLRKL NDYAKKVREKKKVLKHVVVHGGSSSVVVSTPTSSSSSTDQQHHHQQQQQQQQQQQQQQ QQQQVLAVAAAAAAAAAANCTNEHTINLNQATTTATTTTTDEAGTPQPAEDQQHLVTA AAYQQHQALAGVEYMGQGMFLAPGSLRPPMQLKQEPQTPQQQQITQQQLQQQHQRYTI TGQQQQQVTAALLEGTEPGSIFVQQIYGDEGGKGTAKLLQAHVPHFSIAGGQLELYPH KYAAKKQELQLQRNLESNTNS" misc_feature 1508..>1897 /gene="CG14442" /locus_tag="Dmel_CG14442" /gene_synonym="Dmel\CG14442" /note="hypothetical protein; Provisional; Region: PRK12705" /db_xref="CDD:237178" ORIGIN 1 atccctactg tgaacagaac gattgttgaa atgaaaacaa ctgaaataag atgaattaaa 61 ttaaattaaa gatacagtac cacggattgc gaacaagtac gcatacttca agttaatgac 121 attacggtgc gatcggaagt ggcagatata cgctggtccc agctatgtgg aaaattcccg 181 gtagttaagt taacgctgcg ccgccacaga acatcctttt aacccaccaa gagaaaaggc 241 gcctggatgc accgcagcac ggcgaataaa tggaattaca aatcaaaggg ttaaggtttg 301 tgcaaaaagc aaaataagga gcggaaaaaa actcgcacac acgtacgttg cgtattgctt 361 cgttgcgcgt gtgtgtgtgt gtgtttagca gtgcgtgctt gtgtgtgcgg acggcggctg 421 catgggtgtg tgtgtataat catgtgaaaa atcgattggc agcgcagaag cagcgcggcg 481 gcggcgccaa ttgtcactga ctcgcaagaa gaagcacgct tttatgaaaa cgcacgaaaa 541 attgtaatgg ccaaatacga acggtaataa agtgcataat gctaaaaatg gagaagaaga 601 ataccgctca tagccaaaaa gggaacgaaa gaaatgcccg aggaccacaa taacaatagc 661 ggagtgatcg ccgcaaaaat agagtgcgag agagaaacgg cgccagcaca cacatattct 721 ttatataact actagtaagc aaaaagcgaa acaaaacaaa cacaaagagg aaacgccaag 781 gagcagcgga cgaaaaaaag agcgggagac ggcccagagc gtgcgaaaga gagggggcga 841 gcaagagcgc ggcccctaga tgttatcgaa acaatcggaa ggactgcgct catcctttcg 901 ataaccaaat acccatcgtc tatatacaca tatatagata tatatctata aatatatata 961 taaatatata tatatacata acaaacagta cacttttgga gccccgatag acgacaattt 1021 cgattgttgt tgccccggct tttgaccaag aatggaacca gatcccaatg ggataaaaat 1081 agagccctca cttgatcagc agcagtacgc cacccatgtg ctggccatca atggctccaa 1141 tgcccgcctg ctcatcgagc atccctcagc tttgttggta ccactctcct cgcatcacca 1201 gctgcaattg caacagcagc aacaacagca gcagcacgta cagcagcaac atcaacaaca 1261 gcagcagcag catcagcaac aacagcaaca gttccagcag caacatcttc accagcagca 1321 acaggatcaa ctgcagttcc agcaacagca tctccagctt tatgcaccac tgaagcaaca 1381 gcaattgcag cagcagcaat cgcagcagcc acccactcca ttgggaccca ccagcagtgc 1441 cagttccgca tccataacag gtgcctccac cactggccac cagcagaggt ggaacgagag 1501 ccccgaggca cgccagcgcc gtctggccag aaatgctgaa aggatgcggg aacgccggca 1561 gcgcgagagc gaggaggagt atcgcaagcg actactccgg aatgcagaag ccaatcgcca 1621 gagacgccag aatgaatccg acatagagcg ggccatgcgg ctagtgagga atgcggccag 1681 gcaacggcta cgccgggcca tggagtcgcc ggaccagagg gccaaacggc tggccaaatt 1741 ggccgaaagg atgcgcatgt atcgcgccag cgagacgaac gatcagcgaa agctccggct 1801 ggcagaaatg gcggcaaggg cgcgccaaag gatcgccaat gagtcaccgg aggagcggaa 1861 ggaaagactg agaaagctga acgattatgc caaaaaggtc agagaaaaga agaaggtact 1921 gaagcatgtt gtggtgcacg gtggttcgtc gtcggtggtc gtctcaacgc cgacatcctc 1981 ctcgtcgtca acggaccagc agcaccacca ccagcagcag cagcagcaac agcagcaaca 2041 acagcagcag caacaacagc agcaggtgct ggctgttgca gcagcagccg cagcagcggc 2101 ggcagccaat tgtactaacg aacacactat caatctaaac caggcgacca ccacagcgac 2161 gacgacgaca acggacgagg caggcacccc gcagcccgcg gaggatcagc agcatctggt 2221 gacagcagcc gcctatcagc aacaccaggc cctggccgga gtggagtata tgggacaggg 2281 catgtttctg gcgcccggct ccctacgtcc acccatgcaa ctgaagcagg agccacagac 2341 gccgcagcag cagcagatta cacagcagca gctgcagcag cagcatcagc gatacaccat 2401 caccggacag cagcagcaac aggttacggc tgctctgctc gagggcaccg agccgggcag 2461 catctttgtg cagcagatct atggcgatga gggtggcaag ggcaccgcaa agctgctcca 2521 ggcccatgtg ccgcacttca gcatcgccgg tggccagctg gaactctacc cgcacaaata 2581 tgctgccaag aagcaggaac ttcagttgca gaggaatttg gaatcgaata caaattcgta 2641 gcgctgttgg cgaaatcaac tgcctcaaag gaaaatgctt gaaaccggaa agtaggaatt 2701 ttgaaaatat atagaattca atggaaattg gcagaagaag cggccaatgg acctctcttt 2761 ttttttgcgc gttgccttac ccgcatttta actcctcttt tgatcaaaag cgaaaatcgt 2821 ataagtttat ttcagttaac attattgttc gttgttcata ttacttgtgt tagttctttt 2881 ttttggtcag aagcaaatga attaatcaat cgtatagagt gtagatatat gtagcaatgt 2941 aaatcttgaa cctaagaaca aaatactttt accaaccaga aac