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LOCUS NM_001297849 3585 bp mRNA linear INV 26-DEC-2023 N (CG32813), mRNA. ACCESSION NM_001297849 VERSION NM_001297849.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3585) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3585) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3585) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3585) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3585) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3585) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3585) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3585) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3585) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3585) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3585) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3585) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3585) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3585) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3585) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3585) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3585) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3585) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3585 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3585 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 589..2307 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RN; CG32813-PN" /codon_start=1 /product="uncharacterized protein, isoform N" /protein_id="NP_001284778.1" /db_xref="FLYBASE:FBpp0309605" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKS ETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSSGAA GGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKPDITIQTVGH IRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHTLLNGLGLSA VNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSHHTAGSTSNS AVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNS SGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKID LINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVLQ TQASTS" misc_feature 595..825 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="Myb/SANT-like DNA-binding domain; Region: Myb_DNA-bind_5; pfam13873" /db_xref="CDD:433544" ORIGIN 1 agtatcaaat tagactgcga cggctgctct ttgagtgcgg ccaagaacgg agcaacaccg 61 gagcagagca ctcgaatccc gaatcgggcc agttcggaac gtccaaggtt taaagcaaca 121 actgtgagca gtgaaaaaaa aaataacaga acgagcgttc agctataaac gatatcaaac 181 ccaataggaa gaaacgcaca caaagagccg aaaacaaagt cttcgccaga gagcgctgag 241 tgggacggag aagggaagag gcaatagcga gcgggacagc gagcggctgg cggtcagcga 301 cgttggacaa gtagttgaaa atattgcgca tacgccgcgt gaaccagagg cacagagtag 361 agcagcaagc cgcgcgttct tcgttctgca tcgcacaaat acagctttga gaaagccagc 421 agaggagtgg ggtgcaagga aacacattac gcatcgagga ggagaaggag gagaaggaga 481 agaaggagga gacgaggagg gccgaggatt agcggctgcg aaggaagtcc atttcaaagt 541 gcagccggcc acaaatccag cttcacgacg tcttgcaaac ggttgaaaat ggagaagact 601 ccccggtaca cgcagcggga gcggaacatg gtgttgagct acgcggcgca gtacaaggat 661 gtgatcgaga acaagcgcac ggacgcggag tccaaccgca agaaggacga ggtgtggctg 721 cagatcgcca aggagttcaa ctcgcgggtc taccaccagc gcagcgccaa gcagctgcgc 781 cagctttaca agaacatgaa gctgctgctc aaaaaggacc tatgcggcga ggacaagagc 841 aaccattcgt tcatggacct gctcaacacg ctgtcgcacc aggagtccgt ggcccagtac 901 attgccgagc agctgtcgcc ggagggcgcg ggcggtggcg gcggcggcgg taagcaaggc 961 ggcgcgggca acggaggcgg aaacggacac caatcggacg actacgacga ctccaagatg 1021 ccccactacc acgagggcat ggacacggac gtgatcctta tcaagtcgga gacaattagc 1081 gacaacgagc agacggacaa tggcatggac tgcctggacg aggacgatga cgacgactgc 1141 ttgagccaca aggcgccgga ggtgtgcctc gaggaggagg acgacgtgct ctttccaacg 1201 gacgtgcgcc agctgcagca ggtgggatcg tccggagccg ccggcggtgg tgtctccgga 1261 ggctcccttc ccggaaacat gtctagcaac gggattaccg aaaccagtcg ccgcgccgca 1321 agctcgcccg tgtgctccac gaagacctcg attagttcca gcgggagcta cgcatcagcg 1381 cccaaaccgg acatcactat ccagaccgtg ggccacatac gcgtgggcag ctttgccaac 1441 atcaacaaga cgctgcagaa cggcggctcc ggcacaggag ctgtcctatc agcggccagc 1501 aatggcggct ccagtgccag tggagtgctg ccgctcacag cggagcaagt gcagcagcac 1561 acgctgctga acggcctagg attgtccgcc gtgaatccgg ctcagtctct gcaggcggcc 1621 atcaatgccg cctatgggtc cgccgctcca tcttcatcgg tcgccattag cagccgccgc 1681 acccctccca ctctgcagtt gccacgcctt cagcgcggaa acatcaacaa tagccaccac 1741 actgccggca gcacaagcaa ttccgcggtg gcctccaatg gagtgcaact gttgctcaac 1801 ggcggccacc acgcacagat gacgcacaac catttggcgc gggacaagac aggaggcgtg 1861 gccatcgggg cggcgggcag tttcaacggg tacaacggac tggcagtggc gggcacagtg 1921 tgcagcgcct tgaacagcag cggatccgga gccggaagcg gcgggagcag tgccaacaac 1981 agcggcgtgg gcctggggat cggcggggca cacacgtcgg gcagcggagg aagtggcagc 2041 ggtgggacga ggagccagca ccaggagctg atgaattcgc tgaggatcga ggagagcaag 2101 cggaaaatcg acctgatcaa cgcccaaatc gaatactggc agacgctcac ccgcaagctg 2161 aacagtcagg cgaatcacat gcccaatcct gcgtgcccgt gccacttccc tggagccagt 2221 gtgctctcgc ccgtcgccgt gaccgccgct agtgcctcat cgtccgcttc cgccaatgtg 2281 ttgcagacgc aggccagcac cagctagtcc gcagccaagg ggcggttcga actagtcggg 2341 ggtcctgcgg gcgaaagcga aagcgacagc gacatcatct cgatagtgga catagatgat 2401 gggcggtcta gggaggacga gcagtcggag gacgatggcg agaaccgtga ccaggccata 2461 acggacctga cgctacccga cgaagacgag gaagacgatg tagacgaaga tgactcacag 2521 gatgccttgg tcagggatgt tggcgtggtg ggcggcctgt cgtcgccaga tacaccgccc 2581 cactcctctc cgccgccagc gaagcgctcg aagcgccagg aagtcacctc cgagctcctg 2641 aggcagctgg ccctgcagca gaatcaggat ccccaggagg ggtgctagta ttttgtctag 2701 tttgctaatt ttatacttgc taccatggat tgacgcaacc actttgtaac attaatttta 2761 ccatatatat ttatttacgc ccagtttgag tgccaaaaca gaaaccaaga ttggggcctt 2821 gccatcgaaa atgcttgcca aaggacctgc tgaaataacc ggtcataacc actcgcgacc 2881 cactatttat ttgccagcct aactgaaaca tagcgattca tctcatttta aaatgtcttg 2941 cgtcgcctat ttttttattg cctttttttt tctatacatg taacgtgttt atttttaagt 3001 tttcctacga gctgctacca aaaagaataa gaagaagaag gtgactatct tgaatgtaca 3061 tttactttac aaaactagac cttacttact tacttaatta gagatcgagc agctaagaac 3121 gcatgaaaat gaaatgtaca aatgtggttc ctaatctagt ccctaaagtc aaaagtgaag 3181 aacgaaagag ctacagaaaa gaaatcgaaa ttgttacgcc tagccgagaa cttgtgtatt 3241 atttttttat atcgcttaga ttgttccccc gaggaaagca ttgaaggaac tgtagctaat 3301 ttatgtactt aatgaaccag tgaaaccaaa ccaatgattt gaaatggtgt aaagagaaga 3361 aacttgctag tcgccgctgc ataactgtgt aaatgtggca cacaaaccat ttagttagtg 3421 ttagtgctac tgtacgtgta aaatacaatt aattgcctat ccagacccag taaccacaat 3481 ttacaaggaa gcacacacca aacgaaactg aaaaccaaga aaacaaaact atttatacaa 3541 ttttgtaaac aagaacttat taataaaaca atgaatttac tttgt