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LOCUS NM_001297834 3540 bp mRNA linear INV 26-DEC-2023 D (CG32815), mRNA. ACCESSION NM_001297834 VERSION NM_001297834.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3540) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3540) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3540) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3540) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3540) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3540) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3540) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3540) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3540) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3540) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3540) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3540) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3540) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3540) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3540) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3540) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3540) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3540) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3540 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3540 /gene="CG32815" /locus_tag="Dmel_CG32815" /gene_synonym="CG16994; CG18830; Dmel\CG32815" /map="1D2-1D2" /db_xref="FLYBASE:FBgn0052815" /db_xref="GeneID:318224" CDS 980..2128 /gene="CG32815" /locus_tag="Dmel_CG32815" /gene_synonym="CG16994; CG18830; Dmel\CG32815" /note="CG32815 gene product from transcript CG32815-RD; CG32815-PD" /codon_start=1 /product="uncharacterized protein, isoform D" /protein_id="NP_001284763.1" /db_xref="FLYBASE:FBpp0311621" /db_xref="GeneID:318224" /db_xref="FLYBASE:FBgn0052815" /translation="MYKTIRHGENSLQYTILPQNDDFRIEGKLSGSGRSGSAGGGASS TASVKAKGQRRRRSFFAYLGLIFVCTVIIGAVLIPFLVSAECLPNPAEWFLKTKAALI HSPQPGGGDSAGTSSILPTGSPFLQQNVGRNVKIVNRNGIEQFVIRVNKTNPSASTTR STTTGPNIVATSSSSSSSTSTTTTTTTAPAPTSTSTTTTTTREPPVTTPRYPAPPPPP PATTITTRIIQVPLLKSAAKKPIMPPVLAKVQGPQIQAGGGQNSRLQVQAGTEHESQS KLESESQSEGGGQKSNGAWIKTHWAYIDPSTYFQWSGYKDEDSVLLPALLGFALIGVI LIITVCLVARNKRTIVSSVRKRNRNDIEEQGAEDNATLLTTTNLSDDD" ORIGIN 1 ccaattggac gcgactgcga ggcctgcact ggacaatgtg tggggaagtg ggtcttgtgt 61 cccgcttatc gccactcgat aagccgccac cgtctaaacc cacttttcgg ccccacctcc 121 tcggactggg cttatcgggt cggaatcgac gggctttgcg gcgatgcatg actagctcgc 181 taaatctgga tctgtctgcg ctcgcgattt ctgattgata cattagctgg actcgtcatc 241 gtcatcgtcg ccaggagcgg ccgatagcca gctccagata gccgtggtgc aggctatctt 301 ctggtgcaaa gtctgcttgc gtagaagttc cacaacgatt ggccaagata aaaaattgca 361 tagaccgagt gcttcagcaa atgtgttcgt gggtacttgg atgtgacccg actggatgta 421 gtggggctct ggagctgaca atctcgccaa aagagagatt ttccaagtcg atggatgtga 481 aaactagctg gagtgctgaa acctagccgt tagaattcga ttcaagtgct tcaagtgcca 541 gactcccatt gccaacacta gaaaatgtcc ttaagggacg cgaagagcac ttgccaacac 601 tcggaaatcg cgcctgcgcc ggaaaacaac aagcgcctaa tcaataaaaa cataaaattt 661 agtgcgcaag gagcatcagc atcagcagca ggaacaggaa caggacaaaa acaatattcc 721 ccaaggactc caacagaacg cacagcacct tccgttgagg ccgagaaagc cacattcgat 781 tggcaggagc ttcgaggaca gaggatacgc agctaccagg tctgcagccc gcaagagtga 841 acattgagga tttgctgtcg caaagggccc atctgaggct ctgagcagcc aggtgaacca 901 gtcaggtcca gggaagaaag ctccagagga tcgaggcagc cgcggaagca tcccaagcgc 961 atacgaagaa caggacaaga tgtacaagac catcaggcac ggggagaaca gcttgcagta 1021 cacgattctg ccccagaacg acgacttccg catcgagggc aagctctcgg gctcgggacg 1081 atcgggctcc gccggcgggg gagcctcctc caccgcctcc gtcaaggcca agggccagcg 1141 acgccggcga tccttcttcg cctacttggg cttgatcttc gtgtgcaccg tgatcattgg 1201 cgccgtgctc atacccttcc ttgtgtccgc cgaatgtctg ccgaaccccg cagaatggtt 1261 cttgaagacc aaggcggccc tgatccacag tccgcagcca ggcggtggag attcggctgg 1321 cacttcctcc atactgccca caggatcgcc ctttctgcag cagaacgtgg gccggaatgt 1381 gaaaattgtg aaccggaatg gcattgagca gttcgtaatt cgggtgaaca aaaccaatcc 1441 gagtgctagc accaccagga gcaccaccac tggccccaac atcgtggcca ccagttccag 1501 cagcagcagc agcacctcca ccacaacgac gacgacaacc gctccagccc ccacaagcac 1561 aagcaccacc actacgacaa ccagggagcc gccggtgacc actccgaggt acccggcccc 1621 gccgccgcct ccgccggcga ccacgatcac cacccgcatc atccaggtgc ccctactcaa 1681 gtccgccgcc aagaagccca taatgccgcc agtgctggcc aaagtccagg ggccgcagat 1741 ccaggccgga ggaggccaaa actccaggct gcaggtacag gcgggcacgg agcacgagtc 1801 gcaatcgaaa ttggaatcgg aatcgcaatc ggagggcgga gggcaaaaga gcaacggtgc 1861 ctggataaag acgcactggg cctacatcga tccatcgacg tacttccaat ggagcggcta 1921 caaggacgag gatagcgtgc tgctgcccgc tctgctgggc ttcgccctca tcggagtgat 1981 tttgatcatc acggtctgcc tggtggcacg caacaagcgc accattgtgt cctccgtccg 2041 caagcggaat cgcaatgaca tcgaggaaca gggcgccgag gacaacgcca ccctgctgac 2101 caccaccaac ctgtcggacg acgactaatt ggagctcgtt cagatgattc cctgttcgcc 2161 ctcggttcca gcttttgatt tccggcctgc ttgagcgatc caaagtcgct ggctgggcca 2221 tcgcccactt cgcccatccg tttgagacac acacgattac ccagacacct ggacctgctg 2281 agatggctcc acgccagctg atccagtatg ctaatcccga tcccgatccc caaatttccc 2341 ctccgcttct ggccatgagg caggcggaag gcggagcaaa gagtaatcca agcacgaaga 2401 agactgtttc tgaaactact gtttagctat ccccaaattt ttccaatgct tgtcttcacc 2461 ccgcactgtc ccccccctct taccaatcac ccatccttac aaaactgtgt gcgtgtgtgt 2521 gctgatagtg tgtgtgtatg tgtgtgtgtg tgatccccaa gatacccgtt acttataaat 2581 atgcataaat gcaagagcta gcttgataac ttgacgtgcg agggatgtgg tggtgtccac 2641 gctggccact gagcccctcc gtgcaccacc aatagctggg ctctcggcac gaagatgtga 2701 caatgttcga tctcatccga agtactttcc aaactaaccg agctttttaa acacaatcca 2761 ccttttgtgt ctgctgttcc tgctgctctg aaaccaattg gtggacgcat cgcggaaaag 2821 ggagcaccga ggcacaaaag caccgaggca cagccctcgg aaaacgcact caaatcaaat 2881 gaaacgtcca gagatatgaa tatttttttg caagcgacta cacctaattt gcagcacagg 2941 caggcgggga tggggatggg gatgcaagtc cgtcttggcc caaaacgctt ggcgattcga 3001 ttcgattcga ttcagatggg acagttgggc agtgagcagt agggcggtga gaaaccgtag 3061 cgggggacta ctgttcgtct atataaactg tgtataactg tgaggcattg acaagtattt 3121 gagatgatct gtatttttgt aagcgtaata tttaaagcgg cagccaataa cgagacaacc 3181 aaatccagag aagcaactat aaagcgtaag atatcgggcg cagcagccaa cacacgcgac 3241 acacaattta tttgctcaac gcagtacaca ccacacatga tacatacagc ataaatgtaa 3301 atatatatat atttatctgc atacatatat atatatacag agtaagttac gcaaagtatg 3361 aggcttgcat ttacatttac gagcgggata tatcctccat atgtatatgt tatcactaat 3421 ttgcaaagct aaactaagtc catatataca aaccaaatat cggaggtgca agtgacgaac 3481 acacactata ttgaatgttt ttgcttgtta aagtaaataa taaaaatgaa aactcgaaat