Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NM_001201653 2986 bp mRNA linear INV 26-DEC-2023 ACCESSION NM_001201653 VERSION NM_001201653.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2986) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2986) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2986) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2986) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2986) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2986) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2986) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2986) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2986) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2986) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2986) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2986) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2986) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2986) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2986) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2986) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2986) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2986) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_001201653.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2986 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2986 /gene="Amun" /locus_tag="Dmel_CG2446" /gene_synonym="amun; anon-WO03040301.104; anon-WO03040301.105; anon-WO03040301.107; CG2446; Dmel\CG2446; EP1503" /map="10D6-10D7" /db_xref="FLYBASE:FBgn0030328" /db_xref="GeneID:32123" CDS 648..2300 /gene="Amun" /locus_tag="Dmel_CG2446" /gene_synonym="amun; anon-WO03040301.104; anon-WO03040301.105; anon-WO03040301.107; CG2446; Dmel\CG2446; EP1503" /note="CG2446 gene product from transcript CG2446-RI; CG2446-PI; Amun-PI" /codon_start=1 /product="amun, isoform I" /protein_id="NP_001188582.1" /db_xref="FLYBASE:FBpp0292402" /db_xref="GeneID:32123" /db_xref="FLYBASE:FBgn0030328" /translation="MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQEL IRLDQWYQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAV IQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEI EGIDYTTKEYLNFVNHIQATVERLNAEVGGDTPHWSPHRVELALWSHYVANDLSPEML DDMPPPGSGASTGTGSLSTNGNSSKVLDGDDTNDGVGVDLDDESQGAGGRNTATESET ENENTNPAALTPLQSGEAKNNAAAVGAALQDGDSNFVSNDSTSQEPIIDDNDGTTQTT ATTSTEDGEPIALDIGIGIGSSGTPLASDSESNQEAPPKTNSLPILTPTQHSSQNQNQ KQSPSQPHKTNNSITNNGQPAPLAEEEAVTAAPQPASKATAAPANGNGNGNGVLGDED EDEAEDEEEDELDEEEDNEAELEADESNSSNGIVRDSKLQQLAANKAVDAVSPVAAGA DSAPAIGQKRTALHCDMELKNAGGVGVGVGEKSPDLKKLRSE" ORIGIN 1 acattcgggc accgagtgcg ggcgagatag aacgacaact cctgttcccg gttcgtcgtc 61 gttcgtcatt cccatattcg cttctcgtat tccctcccat tcccattcgc aatcccaatt 121 cccaattccc gtcacacgag ttagcagcac atcgcacagc tgcatcgctc cgctccgatc 181 ctttttaatt ttttgttgtg ccttcggtgg cgtgctcatt tcgagaacag agtaacccct 241 ttttatttgt cagttgtcaa cggcgcccct gcaggcagaa agcagaaact gaaacagcag 301 aggaagaaga agaagcagca cagcacgggc acagcacgaa gcacgcagca cagcacaagc 361 acagaggcga agcgaagcaa agcaaagcag aggcaacaca gaaaaacagc aaagcattgg 421 agtagttgtt tggatgtgga cggaaaggaa gactggcggc gactaactaa aagcagtacg 481 ttgacaggag cagctcggaa cggacaggaa aagcaggaga ctaaacaccg gtcacttgcg 541 gatcagccaa cgtcctgggc cccaaggcga tagataccac gataaggaga tacagcgata 601 ccaccaatca ttagcaggcg acaacgacac atccgcatcc gcagaagatg tccaacggca 661 aggcgacggt ctcgttcttc gagaccggga gcaccaaaca gttcgagtac tgctaccagc 721 tctatcccca ggttcttaag ctaaaggccg agaagcgctg caagaagccg caagagctga 781 tccgcctgga tcagtggtat cagaatgaac tgcccaaatt gattaaggca cgcggcaagg 841 acgcgcatat ggtatacgat gagctcgtcc agtcgatgaa gtggaagcag tcgcgcggca 901 aattctatcc gcagctatcc tacctggtca aggtcaacac accgcgcgcc gtcatccagg 961 agacaaagaa ggccttccgc aagctgccca atctggagca ggcgatcaca gctttatcga 1021 acctcaaggg cgttggcacc acaatggcca gtgcactgct ggcagccgca gctcccgatt 1081 cggcaccatt catggccgac gagtgcctga tggccatacc agagatcgag ggcatcgatt 1141 acaccaccaa ggagtacctc aacttcgtca atcacattca ggccaccgtg gagcgcctca 1201 atgcggaggt gggcggggat acgccgcact ggtcgcctca tcgcgtggag ctggccctct 1261 ggtcacacta tgtggccaat gatctcagtc ccgagatgct cgacgatatg ccgccgcctg 1321 gatccggcgc ctccactggc accggttcac tcagcacaaa cggcaacagc agcaaggtgc 1381 tcgatggcga cgataccaac gatggtgtgg gtgttgattt ggacgacgaa agccaaggag 1441 caggcggtcg caacactgct acagaatcgg agacagagaa tgagaacacc aacccggctg 1501 ctctgacgcc tctacagtcg ggcgaggcca agaacaacgc agctgccgtt ggcgccgccc 1561 tgcaggacgg tgactccaac tttgtttcga acgattccac ctcccaggag ccgatcatcg 1621 atgacaacga tggcaccaca cagacaacgg ccaccacttc cacagaggac ggtgagccca 1681 tcgccctaga cattggcatt ggcatcggtt cgagtggaac accgctcgcc tcggactctg 1741 aaagcaatca ggaggcgccg cccaagacca acagcctgcc catcctgact cccacacagc 1801 actcgagcca gaatcagaat caaaagcagt cgccgagcca gccccacaaa actaacaatt 1861 cgatcaccaa caacggtcag cctgctcctt tggcagaaga ggaagcggtt acagcagcac 1921 cacagccagc cagcaaagcg actgcagcac cagccaatgg aaatggtaac gggaacggcg 1981 tcctgggcga cgaggatgag gatgaggcgg aggacgagga ggaagatgag ctggacgagg 2041 aggaggataa tgaggcggag ctagaggctg acgagagcaa tagcagcaac ggcattgtga 2101 gggacagtaa actgcagcag ctggcggcga acaaggcggt ggatgcggtt tcaccggtag 2161 cagcgggtgc agactcggca ccagccattg gacagaagcg tactgccctg cactgcgata 2221 tggagctgaa gaacgccggc ggagtgggtg tgggcgtggg ggagaagtca ccggatctaa 2281 agaaactgcg cagcgaatga ggcggaggtg aggaaacgaa atacggatac ggatgcggat 2341 gcgggtcaga aacggggatc ggttcggctc ggcacgtttc ggttcgccgc gtatccggtg 2401 gaaagacata tgtatgtagt gcagttgagt cgacatagag acatagagca acattaccta 2461 cactttacca caacaacatt caagaaattc tactattaag caactaacta tacatacata 2521 taatatatta tatatatata tatatacaca tatatatata tatatataca acatataacg 2581 agatgcgaac acccaacaca ctccactctc atacacacaa cacagacaca cacaacccga 2641 cataacatga acataaccga tcagatcaga gcggaatata ggatcccgat ccagaaggca 2701 gtaagcagca ccacaaacaa catttcaata gcatagaaag cgcgccaaga tgaagaatca 2761 gaagaatccg atcaagaatc cgaagaacaa gcagcagaat cagcagcaac agagagttca 2821 gaatgcagcg ttaacgtaat ttaactaaaa cgaaaagcaa atgcatacat gaatagtaac 2881 tacaaaacaa gatcagatgg aaatcgatat ttttacacag tcaaaaggaa catttaaata 2941 taaagaaatt tacaaatgcc gcagttgccc actacataca aaaaac