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LOCUS NM_001201622 2296 bp mRNA linear INV 26-DEC-2023 C (CG14439), mRNA. ACCESSION NM_001201622 VERSION NM_001201622.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2296) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2296) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2296) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2296) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2296) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2296) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2296) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2296) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2296) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2296) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2296) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2296) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2296) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2296) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2296) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2296) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2296) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2296) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001201622.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2296 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2296 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /map="6C11-6C12" /db_xref="FLYBASE:FBgn0029898" /db_xref="GeneID:31614" CDS 380..1987 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="CG14439 gene product from transcript CG14439-RC; CG14439-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_001188551.1" /db_xref="FLYBASE:FBpp0291553" /db_xref="GeneID:31614" /db_xref="FLYBASE:FBgn0029898" /translation="MIPILEKLSGFYNTYVLAVLTIGYILGELGHYLIGVTSKQTAIE LDYGDHACQQNTSMFNRHELPTQCSAVMNETSCYALDFNGTGYCEWNYNGLGIDYQIL AGPTFILIFTIAGVFMGFAADKYNRVNMLTVCTVIFGIAMILQGTVKEYWQLVILRMI MAAGESGCNPLATGIMSDIFPEDKRALVMAIFNWGIYGGYGIAFPVGRYITKLNFWNL GWRVCYLGAGVLTVIMAALTGTTLREPERKAIGEGDRQTSSGKPVSLWQVIKNPAMIM LMIAASIRHCGGMTFAYNADLYYNTYFPDVDLGWWLFGVTIGIGSVGVVVGGIVSDKI VAKMGIRSRAFVLAVSQLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVV EIVPLRVRSSTIGVFLFVMNNIGGNLPILVDPVAKILGYRGSIMIFYAGFYGISSILF FITCFLLEGKPDEVGQPESPKSHPDAVLNARHMHGHDNSVFSVDETLPSNGRPAQLPQ HLQMSSNGYDKSQISPPRQNGAESSRL" misc_feature 578..1750 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; Region: MFS_spinster_like; cd17328" /db_xref="CDD:340886" misc_feature order(608..613,620..625,632..634,722..724,872..877, 881..889,896..898,956..958,965..970,977..979,1220..1222, 1229..1234,1241..1249,1256..1258,1337..1339,1349..1351, 1502..1507,1517..1519,1529..1531,1589..1591,1598..1603, 1610..1615,1622..1624) /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340886" ORIGIN 1 gttttagttc tgttcgccaa acgcagccaa ctggacgtgt cccaaaaaaa aaaaaacaag 61 cggcgttttt cgaagtccag ggcaacacat ttccacggtt cggactgaac agaattgtgt 121 gttcctcacc attttttttt ttttccatcg aattgtttgt tctgtatatt aaaacgcctt 181 gacagtactc aattgctcgc cgacgcgtgc ttgtgtgcaa ttaatttaaa tccatcgagg 241 ggtaccataa ttctcgacag tttttgtgtg tcagtgccaa agccaccaat cgatcgatcg 301 accgatcgac agatcgaaca agaaaatata tatacatata gcagcagttc gtcgagtggt 361 aaagttcatc ggccccaata tgatacctat tctggagaaa ctcagcgggt tctacaacac 421 ctacgtcttg gccgtactca ccattggtta tatcctgggc gaattgggtc actatctgat 481 cggagtgacc tccaagcaga cggccattga gttggactac ggtgatcatg cctgccagca 541 gaacacctcg atgttcaatc gccacgagtt gcccacccag tgctcggcgg ttatgaatga 601 gaccagctgc tatgcccttg atttcaacgg cactggctat tgcgagtgga actacaatgg 661 actgggcatc gactaccaga tcctggccgg acccaccttc atcctgattt tcaccatcgc 721 cggcgtattt atgggcttcg cagcggacaa gtacaatcgc gtcaacatgc tgactgtgtg 781 cacagtgatc ttcggcattg ccatgattct gcagggcacc gttaaggaat actggcagct 841 ggtaattttg cgtatgatca tggcagccgg cgagtcgggt tgcaatccct tggccacggg 901 cattatgtcc gatatctttc cggaggataa gagagcacta gtcatggcca tcttcaactg 961 gggaatttat ggaggatatg gaatcgcctt ccccgtgggt cgctacatca ccaagctgaa 1021 tttctggaat ctgggatggc gcgtttgcta cttgggcgcc ggtgtcctta ccgtaattat 1081 ggccgcactg accggaacca ctttgcggga gccggagcgc aaggccatcg gtgagggtga 1141 ccgccagacg tctagcggca aaccagtgag cctgtggcaa gttatcaaga atccggcaat 1201 gatcatgttg atgattgccg cgtccatccg tcactgcggt ggcatgacct ttgcctacaa 1261 cgccgatctc tactacaaca cgtacttccc cgacgtggac ttgggctggt ggctctttgg 1321 ggtcaccatt ggcattggca gcgtgggtgt ggtcgtcggt ggcattgtgt cggacaagat 1381 tgtcgccaag atgggcattc gatcacgcgc ctttgtattg gctgttagcc agctaattgc 1441 cacactacca gccttcggat cggtctactt tgacccgctg tgggccatga tcacgctggg 1501 cctgagttat ttcttcgccg agatgtggtt cggtattgtc tttgccattg ttgtggagat 1561 tgttccgctg cgcgttcgct cctcgaccat tggcgtcttt ctgtttgtga tgaacaacat 1621 tggcggcaac ctgcccatcc tggtggatcc ggtggccaag atcctgggct atcgcggttc 1681 gatcatgatc ttctacgctg gattctacgg catcagttct attctcttct tcatcacctg 1741 tttcctgctg gaaggcaagc ctgatgaggt gggacagccg gagtcgccga agagccatcc 1801 ggatgccgtg ctcaatgctc gccacatgca cggacacgac aactccgtgt tctccgtgga 1861 cgagaccttg ccctccaacg gacgtcctgc ccaacttccg cagcatctgc agatgtccag 1921 caatggatac gacaagtccc agatttctcc gccacgacaa aatggcgcgg agagcagtag 1981 actatagatt agcttaagct ccggagtgtt tttttttttt tattaattaa tattatgcaa 2041 tttttatgtt aggttgttaa gatacctgct tcaaattcgg ctaactgata attcgatatc 2101 tgctttacat cagatatcag ttcttaacaa atatgcccga atccggagca ggtgtccttg 2161 cacccagcaa tcataggcct aagcgatgga tccccgagat tcccgcaaca ctgtattttt 2221 agcgcgataa ctgtgtactt aattcgccag gcgattacaa gtgtacaact ttaataaagt 2281 gctgttttgt taacat