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LOCUS NM_001201621 2428 bp mRNA linear INV 26-DEC-2023 B (CG14439), mRNA. ACCESSION NM_001201621 VERSION NM_001201621.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2428) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2428) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2428) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2428) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2428) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2428) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2428) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2428) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2428) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2428) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2428) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2428) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2428) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2428) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2428) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2428) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2428) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2428) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001201621.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2428 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2428 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /map="6C11-6C12" /db_xref="FLYBASE:FBgn0029898" /db_xref="GeneID:31614" CDS 512..2119 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="CG14439 gene product from transcript CG14439-RB; CG14439-PB" /codon_start=1 /product="uncharacterized protein, isoform B" /protein_id="NP_001188550.1" /db_xref="FLYBASE:FBpp0291552" /db_xref="GeneID:31614" /db_xref="FLYBASE:FBgn0029898" /translation="MIPILEKLSGFYNTYVLAVLTIGYILGELGHYLIGVTSKQTAIE LDYGDHACQQNTSMFNRHELPTQCSAVMNETSCYALDFNGTGYCEWNYNGLGIDYQIL AGPTFILIFTIAGVFMGFAADKYNRVNMLTVCTVIFGIAMILQGTVKEYWQLVILRMI MAAGESGCNPLATGIMSDIFPEDKRALVMAIFNWGIYGGYGIAFPVGRYITKLNFWNL GWRVCYLGAGVLTVIMAALTGTTLREPERKAIGEGDRQTSSGKPVSLWQVIKNPAMIM LMIAASIRHCGGMTFAYNADLYYNTYFPDVDLGWWLFGVTIGIGSVGVVVGGIVSDKI VAKMGIRSRAFVLAVSQLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVV EIVPLRVRSSTIGVFLFVMNNIGGNLPILVDPVAKILGYRGSIMIFYAGFYGISSILF FITCFLLEGKPDEVGQPESPKSHPDAVLNARHMHGHDNSVFSVDETLPSNGRPAQLPQ HLQMSSNGYDKSQISPPRQNGAESSRL" misc_feature 710..1882 /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; Region: MFS_spinster_like; cd17328" /db_xref="CDD:340886" misc_feature order(740..745,752..757,764..766,854..856,1004..1009, 1013..1021,1028..1030,1088..1090,1097..1102,1109..1111, 1352..1354,1361..1366,1373..1381,1388..1390,1469..1471, 1481..1483,1634..1639,1649..1651,1661..1663,1721..1723, 1730..1735,1742..1747,1754..1756) /gene="CG14439" /locus_tag="Dmel_CG14439" /gene_synonym="Dmel\CG14439" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340886" ORIGIN 1 gttttagttc tgttcgccaa acgcagccaa ctggacgtgt cccaaaaaaa aaaaaacaag 61 cggcgttttt cgaagtccag ggcaacacat ttccacggtt cggactgaac agaattgtgt 121 gttcctcacc attttttttt ttttccatcg aattgtttgt tctgtgtaag tggcgttttt 181 cgtctttcgt ctgtcgtgtc gcgttatctt ctccgttgat gttgattgaa ttgaaacgaa 241 ctcggatgct ctggctgcaa atttatgaaa gaaaaaaaaa tatatatata tttatagata 301 ttaaaacgcc ttgacagtac tcaattgctc gccgacgcgt gcttgtgtgc aattaattta 361 aatccatcga ggggtaccat aattctcgac agtttttgtg tgtcagtgcc aaagccacca 421 atcgatcgat cgaccgatcg acagatcgaa caagaaaata tatatacata tagcagcagt 481 tcgtcgagtg gtaaagttca tcggccccaa tatgatacct attctggaga aactcagcgg 541 gttctacaac acctacgtct tggccgtact caccattggt tatatcctgg gcgaattggg 601 tcactatctg atcggagtga cctccaagca gacggccatt gagttggact acggtgatca 661 tgcctgccag cagaacacct cgatgttcaa tcgccacgag ttgcccaccc agtgctcggc 721 ggttatgaat gagaccagct gctatgccct tgatttcaac ggcactggct attgcgagtg 781 gaactacaat ggactgggca tcgactacca gatcctggcc ggacccacct tcatcctgat 841 tttcaccatc gccggcgtat ttatgggctt cgcagcggac aagtacaatc gcgtcaacat 901 gctgactgtg tgcacagtga tcttcggcat tgccatgatt ctgcagggca ccgttaagga 961 atactggcag ctggtaattt tgcgtatgat catggcagcc ggcgagtcgg gttgcaatcc 1021 cttggccacg ggcattatgt ccgatatctt tccggaggat aagagagcac tagtcatggc 1081 catcttcaac tggggaattt atggaggata tggaatcgcc ttccccgtgg gtcgctacat 1141 caccaagctg aatttctgga atctgggatg gcgcgtttgc tacttgggcg ccggtgtcct 1201 taccgtaatt atggccgcac tgaccggaac cactttgcgg gagccggagc gcaaggccat 1261 cggtgagggt gaccgccaga cgtctagcgg caaaccagtg agcctgtggc aagttatcaa 1321 gaatccggca atgatcatgt tgatgattgc cgcgtccatc cgtcactgcg gtggcatgac 1381 ctttgcctac aacgccgatc tctactacaa cacgtacttc cccgacgtgg acttgggctg 1441 gtggctcttt ggggtcacca ttggcattgg cagcgtgggt gtggtcgtcg gtggcattgt 1501 gtcggacaag attgtcgcca agatgggcat tcgatcacgc gcctttgtat tggctgttag 1561 ccagctaatt gccacactac cagccttcgg atcggtctac tttgacccgc tgtgggccat 1621 gatcacgctg ggcctgagtt atttcttcgc cgagatgtgg ttcggtattg tctttgccat 1681 tgttgtggag attgttccgc tgcgcgttcg ctcctcgacc attggcgtct ttctgtttgt 1741 gatgaacaac attggcggca acctgcccat cctggtggat ccggtggcca agatcctggg 1801 ctatcgcggt tcgatcatga tcttctacgc tggattctac ggcatcagtt ctattctctt 1861 cttcatcacc tgtttcctgc tggaaggcaa gcctgatgag gtgggacagc cggagtcgcc 1921 gaagagccat ccggatgccg tgctcaatgc tcgccacatg cacggacacg acaactccgt 1981 gttctccgtg gacgagacct tgccctccaa cggacgtcct gcccaacttc cgcagcatct 2041 gcagatgtcc agcaatggat acgacaagtc ccagatttct ccgccacgac aaaatggcgc 2101 ggagagcagt agactataga ttagcttaag ctccggagtg tttttttttt tttattaatt 2161 aatattatgc aatttttatg ttaggttgtt aagatacctg cttcaaattc ggctaactga 2221 taattcgata tctgctttac atcagatatc agttcttaac aaatatgccc gaatccggag 2281 caggtgtcct tgcacccagc aatcataggc ctaagcgatg gatccccgag attcccgcaa 2341 cactgtattt ttagcgcgat aactgtgtac ttaattcgcc aggcgattac aagtgtacaa 2401 ctttaataaa gtgctgtttt gttaacat