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LOCUS NM_001103503 3344 bp mRNA linear INV 26-DEC-2023 variant C (Tpst), mRNA. ACCESSION NM_001103503 VERSION NM_001103503.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3344) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3344) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3344) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3344) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3344) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3344) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3344) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3344) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3344) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3344) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3344) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3344) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3344) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3344) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3344) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3344) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3344) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3344) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_001103503.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3344 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3344 /gene="Tpst" /locus_tag="Dmel_CG32632" /old_locus_tag="CG15758" /old_locus_tag="CG32629" /old_locus_tag="Dmel_CG15758" /old_locus_tag="Dmel_CG32629" /gene_synonym="CG1573; CG15758; CG15759; CG32629; CG32629/CG32632; CG32632; Dmel\CG32632; DmTPST; Tango13; TANGO13; TPST" /exception="dicistronic gene" /note="Tyrosylprotein sulfotransferase" /map="12A4-12A7" /db_xref="FLYBASE:FBgn0086674" /db_xref="GeneID:32312" CDS 1687..2727 /gene="Tpst" /locus_tag="Dmel_CG32632" /old_locus_tag="CG15758" /old_locus_tag="CG32629" /old_locus_tag="Dmel_CG15758" /old_locus_tag="Dmel_CG32629" /gene_synonym="CG1573; CG15758; CG15759; CG32629; CG32629/CG32632; CG32632; Dmel\CG32632; DmTPST; Tango13; TANGO13; TPST" /EC_number="2.8.2.20" /note="CG32632 gene product from transcript CG32632-RC; CG32632-PC; Tpst-PC; transport and golgi organization 13; tyrosylprotein sulfotransferase" /codon_start=1 /product="tyrosylprotein sulfotransferase, isoform C" /protein_id="NP_001096973.1" /db_xref="FLYBASE:FBpp0112355" /db_xref="GeneID:32312" /db_xref="FLYBASE:FBgn0086674" /translation="MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANE LSSQMVRVEKYLTDDNQRVYSYNREMPLIFIGGVPRSGTTLMRAMLDAHPDVRCGQET RVIPRILQLRSHWLKSEKESLRLQEAGITKEVMNSAIAQFCLEIIAKHGEPAPRLCNK DPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIISRKVTITGFDLSSYRQCMQKWNH AIEVMHEQCRDIGKDRCMMVYYEQLVLHPEEWMRKILKFLDVPWNDAVLHHEEFINKP NGVPLSKVERSSDQVIKPVNLEAMSKWVGQIPGDVVRDMADIAPMLSVLGYDPYANPP DYVKGQSNAVGE" misc_feature 1903..2478 /gene="Tpst" /locus_tag="Dmel_CG32632" /old_locus_tag="CG15758" /old_locus_tag="CG32629" /old_locus_tag="Dmel_CG15758" /old_locus_tag="Dmel_CG32629" /gene_synonym="CG1573; CG15758; CG15759; CG32629; CG32629/CG32632; CG32632; Dmel\CG32632; DmTPST; Tango13; TANGO13; TPST" /note="Sulfotransferase family; Region: Sulfotransfer_3; pfam13469" /db_xref="CDD:463887" ORIGIN 1 cacactctgc ccccaaacag ctccaaaatc ggttgtcgtc gcgaaaagtg cgaatcgagt 61 gcatatttgc tgcaaaaaga agcgagaaca cggtgacgtg acgaaagcat tcgagtgacg 121 aagagtgcga gcgcgctgca tttgtttacg attccgattc cgatgccatt ggtcaattgg 181 taaggggctt tgggaagtgt aagaggaaga gcgtgcggcg cggcaagtaa cgaaagaaga 241 agaagcagca gcagcagggc acacgcaacg tgcaacattg tgtgcgagcg tgtgtgcgtg 301 tttgtttgtt tgtgtgacaa aaatacaaca agtgcaagca acaatagtta gcggcagcaa 361 caacaacagc accgaaactc cttgccagaa cgagacagca ataacaacag gagtgcgaaa 421 gcgggagaga aagagagaca gctgttattg ttgttgttgt tgctttacaa tgtttaatgg 481 gaaacctgcc gccaaaacaa caacaaatca ggtatgacgg aggaaataac cggcgattgg 541 agctactacg tgtatatatc gctgacgttg gttccagtct atttggcatt tcggctcatt 601 aagtcgctgg gctggcagct cttcgtcaac aactgagcaa acatctggac ccgaaactgt 661 agctcaagct gaagctgaag ctgaagcaac atatatctgt ggcacaaact gaaactgaag 721 ttgcagccgt catcagggga atccgtcgtc gcggaaaaaa ggaaaaagac gagcgcggcc 781 aaagtcgatg agcgtgttat caatgtgtat atatattttg taagaatgca ataaatggaa 841 agccaggact agaaggcggc agaacaagag gagtgataaa taggggaacc tgcggcagct 901 gctaggattg ccagttggac agtcgggaca ctgccaggat tgccaggatc gtgttctgtt 961 gtgttatgct gcgttgttgt tggccaagcc aaccgttgtt gttgctgctt ctggctggcc 1021 aaaaaggagc aaacaaaagg cgaggcgatg caaagcaatc aacgtcataa gcaggagcag 1081 cagcaggacc agaaccagca ccagaaacag gaacagagac cagaacacag accggaacag 1141 gaccaccaag accgtggacg gagttattgt ggtggcaccg ccaagccgcc gccgcatcag 1201 catcagcatc agcagtatcc tgcactatag gcacatcacc gccagcccgt ccaacaccca 1261 acataccgca tcctcccgat attcccaccc tccgcatcct tggcaaacaa gaggagctgg 1321 catcacaagg agcaacacgg caaacggggc actagcaaca gcaacagcaa ctgccttgct 1381 atagcaaaag caaaagccaa agcaaaactc tcgctttgag gacctcaaga aaaccaattt 1441 acatatttaa gctttgggca aacgtagatg cggagtagca actagacgca atcaatagga 1501 gctgggataa gaaaaaatac cgacgagtgg gcgcctccgg gaagaagaga gcagcactcc 1561 acaccactcc accccacaca ccagatcaga tcagattgga gaaggccagg agtagaccac 1621 atcatcgtca ttcgccgtca tccgaatcaa aggccagtta tctgcgacac ctagaccatc 1681 gccagaatgc gactgccata tcgaaataag aaggtcaccc tgtgggtgct cttcggcatc 1741 atcgtcatca ccatgttcct attcaaattc accgaactgc ggcccacatg cctcttcaag 1801 gtggacgccg ccaacgagct ctcctcccaa atggttcgcg ttgagaaata cctcacagat 1861 gacaatcaac gcgtttattc atacaaccgt gagatgccat taatattcat aggcggcgtg 1921 ccgagatctg ggacgacttt gatgcgcgcc atgctggatg cccatcccga tgtgcgctgc 1981 gggcaggaaa cccgtgtcat tccgcgcatc ctgcagctgc gctcgcactg gctgaagtcc 2041 gagaaggagt cgctccgcct gcaggaggcc ggcatcacca aagaggtcat gaacagtgcc 2101 atcgcgcagt tctgtctgga aatcatcgcc aaacacggcg agccggcgcc gcgcttatgc 2161 aacaaggatc cgctgacgct gaaaatgggc tcctatgtca tcgagctatt tccgaacgct 2221 aaattcctat tcatggtgcg cgacggccgg gcgacagttc attcgattat atcgcgcaag 2281 gtgacaatca ccggcttcga tttgagcagc taccggcagt gcatgcagaa gtggaaccac 2341 gccatcgagg tgatgcacga gcagtgccgg gacatcggca aggaccgctg catgatggtt 2401 tactatgagc agctggtact gcatcccgag gagtggatgc gaaagatact gaaattcctg 2461 gacgtgccat ggaacgatgc ggtgctgcac cacgaggagt tcataaataa accgaacggt 2521 gtgcctctgt ccaaggtgga acgttcgtcg gaccaggtta tcaagccggt taatctggag 2581 gcgatgtcca aatgggttgg ccaaataccc ggcgacgtgg tgcgcgacat ggccgacata 2641 gcgcccatgc tgtccgtgct cggctacgat ccgtacgcga atccgccgga ctatgttaaa 2701 ggccaatcga atgctgtggg agagtaaggc gaagcaagtg ctgcagatgt catccagcga 2761 ggatgacaac acgaacacca tcatcaacaa tagcaacaat aaggataaca acaataatca 2821 gtacacaatc aataaaatta taccagaaca acacagcaga cagcggcaac atgtacagca 2881 gcaacatctg cagcagcagc agcagcagca tctgcaacag cagcaacatc agcggcagca 2941 gcaacagcag caacgtgagg aggagagcga gtcggaaagg gaagcggaac cggatcgaga 3001 acaacaattg ttgcatcaaa agccaaagga tgtcattacg ataaagcagc tgccattagc 3061 tgggagcaac aataacaaca tcaacaataa catcaacaac aacaacaaca acaacaacat 3121 catggaggac cccatggcgg atacatgata tccgcacata cccataagac tgccgcgtgg 3181 caagcattga atctggctaa ctctcttggc tgccgataag gacaacgata atgataactg 3241 ttgctgctgc tgctgttgca agaaaccaat tttaaattgt attagccgag acctttacat 3301 gcttgataca tatatgtacg tgtattaatg cttcgtgaag ttac