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LOCUS NM_001103499 2554 bp mRNA linear INV 26-DEC-2023 transcript variant C (IP3K2), mRNA. ACCESSION NM_001103499 VERSION NM_001103499.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2554) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2554) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2554) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2554) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2554) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2554) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2554) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2554) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2554) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2554) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2554) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2554) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2554) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2554) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2554) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2554) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2554) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2554) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001103499.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2554 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2554 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /note="Inositol 1,4,5-triphosphate kinase 2" /map="11E9-11E11" /db_xref="FLYBASE:FBgn0283680" /db_xref="GeneID:32285" CDS 613..2016 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /EC_number="2.7.1.127" /note="CG45017 gene product from transcript CG45017-RC; CG45017-PC; IP3K2-PC; wavy" /codon_start=1 /product="inositol 1,4,5-triphosphate kinase 2, isoform C" /protein_id="NP_001096969.1" /db_xref="FLYBASE:FBpp0310583" /db_xref="GeneID:32285" /db_xref="FLYBASE:FBgn0283680" /translation="MALYPSSSRPRTLMEQLLARKIEAAAAAGGAPSAATATPTASGS ATPTPSPTSPNPPAVGGMGLPMPLTLGLGLGLGMGMGVVSRLRRTDSLDSTSSLGSLA FGEDVCRCDDCLLGIVDLYVISAAEAAKKKSSGWRKIRNIVQWTPFFQTYKKQRYPWV QLAGHQGNFKAGPEPGTVLKKLCPKEEECFQILMHDLLRPYVPVYKGQVTSEDGELYL QLQDLLSDYVQPCVMDCKVGVRTYLEEELSKAKEKPKLRKDMYDKMIQIDSHAPTAEE HAAKAVTKPRYMVWRETISSTATLGFRIEGIKKSDGTSSKDFKTTKSREQIKLAFLEF LSGHPHILPRYIQRLRAIRATLAVSEFFQTHEVIGSSLLFVHDQTHASIWLIDFAKTV ELPPQLRIDHYSAWKVGNHEDGYLIGINNLIDIFVELQASMEAEAHAQAQAEAIQSPV SGSGGDQAEQTGEESKP" misc_feature 1261..1890 /gene="IP3K2" /locus_tag="Dmel_CG45017" /old_locus_tag="CG12724" /old_locus_tag="CG1630" /old_locus_tag="Dmel_CG12724" /old_locus_tag="Dmel_CG15745" /old_locus_tag="Dmel_CG1630" /old_locus_tag="Dmel_CG34359" /gene_synonym="CG12724; CG15745; CG1630; CG34359; CG4501; CG45017; D-IP3K2; DIP3K2; Dmel\CG45017; dmIP3K2; dmIP3Kbeta; dmIP[[3]]beta; ip3k2; IP[[3]]K-2; IP[[3]]K2; NP2758; wy" /note="Inositol polyphosphate kinase; Region: IPK; pfam03770" /db_xref="CDD:397715" ORIGIN 1 ggttgttagt tggatagcag ccggatagct tggcttgttg ccgctgtaac ggcgatgcct 61 cagtcgcccg agtgccgttc caaagtcaac aagcggtcga tcgagcagct ccgatccaat 121 tcgtttcgat acgcggccat ataccctaac cataccatac tatactatag catatatcca 181 tacccatacg atacggatac ggatacgata acaagataga aaacaaaagg aaaatcgtga 241 aaacaatttt cagtgtgttc ggtttcctta cgtttattta ctttgcgtgg cattataccg 301 ttttttattt atttatttat ttattttttt ttttttgtac gcggaggtgg aggattccca 361 gtgagtgagc agtgagtatg tgccaactat cgcttagcta aaaatagaga ttatcggaat 421 ctcgattgga attagaaaca tatcgtatcg cgaaggggca aacgaaagac ttaggcaaag 481 aactcgccgc ctgcggaggt ggacggagga ggaccaggag gagcggcaga gggagcggca 541 ggaggagagc ggctaggaga agggcccgtt gcaggtgcaa cagccgcagt gggtggcaat 601 cgcctggcgg acatggccct gtatccatcc tcgtcgcgac cgcggacgct catggagcag 661 ctgctggcac gcaagattga ggctgctgcc gcagcgggcg gcgctccctc cgccgctacc 721 gcaactccta ccgcttccgg ctcggccacg cccacgccct cgccaacatc acccaatccg 781 ccagcggtcg gcggcatggg actgcccatg ccactgaccc tgggcctggg cttgggcctg 841 ggcatgggca tgggcgtggt tagccgcctg cgacgcaccg actccttgga ctccaccagc 901 agcctgggtt cgctggcctt cggcgaggat gtgtgccgct gcgacgactg ccttctgggc 961 atcgtcgatc tctacgtgat tagtgccgcc gaggcggcga agaagaagag ctccggctgg 1021 cgaaagattc gcaacatcgt tcagtggacg cccttctttc agacgtacaa gaagcagcgc 1081 tatccatggg ttcaactggc cggacaccag ggcaacttca aggcaggtcc cgaaccgggc 1141 accgtgctca agaagctctg tcccaaggag gaggagtgct tccagattct catgcacgat 1201 ctgcttaggc cctatgtgcc cgtttacaag ggtcaggtga ccagcgagga tggcgaactt 1261 tacctgcagc tgcaggatct gctcagtgac tatgtgcagc catgcgtcat ggactgcaag 1321 gtgggtgtgc gcacctatct ggaggaggag ctgtccaagg ccaaggagaa gcccaagctg 1381 cgcaaggata tgtacgacaa gatgatccaa atcgacagcc acgctcccac cgccgaggag 1441 cacgcagcca aggcggtgac caagccacgt tacatggtct ggcgtgagac catctccagc 1501 acggccacgc tgggattccg catcgagggc atcaagaaga gcgatggcac cagttccaaa 1561 gatttcaaaa cgacgaagtc acgcgaacaa atcaagttgg cctttctcga gttcctcagc 1621 ggtcacccac atattttgcc ccgctacata cagcgtttgc gagccataag ggccaccctt 1681 gcggtctcgg aattcttcca gacccacgag gttatcggca gctccctgct cttcgtccac 1741 gatcagaccc acgccagcat atggctaatt gatttcgcca agacggtgga gctgccgccg 1801 cagctgcgga tcgatcacta ctccgcctgg aaggtgggca accacgaaga tggctatctc 1861 atcggtatca acaatctcat tgatatcttt gtggagctgc aggcatccat ggaggcggag 1921 gcgcatgcgc aagcgcaggc ggaggccatt cagtcacccg tttctggttc tggaggagat 1981 caagcggagc agacgggtga agagagcaaa ccctaatggg aaatccatac atttccacac 2041 ggaggtttgg ggctgggccc cggagacaaa gacatttcca atttccgaat cgattaatcc 2101 ccaattccta ggcttagtta tacatttttt ttttgttttt ttctaacagt ttgcgtacat 2161 ttaacccctt aagtttaaaa tcaaagactg aaatcacaat atgcatacac atatttttta 2221 atatatacga tatacgcgta catatacata tatagaagat atatagcctg gcctatatgt 2281 gctgctgctg ctgctgtagt gtaatttatt tatccaaaac aaaaaaaaaa acaaaaaaat 2341 tcacgtttgg cgaatcctag agatacccga atggctggag ataataccca caaggcagtt 2401 gcaactgtcg atcgtaacga tacgaaaagt aactaagaaa tgaacacacc caacacgcaa 2461 caagagctta gactaagttt ttaatataat ggttatgcga ctacctacta aatactacta 2521 attgtgcact attaaattca gttaaaacaa aacg