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LOCUS NM_001103438 3095 bp mRNA linear INV 26-DEC-2023 C (CG33181), mRNA. ACCESSION NM_001103438 VERSION NM_001103438.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3095) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3095) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3095) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3095) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3095) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3095) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3095) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3095) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3095) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3095) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3095) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3095) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3095) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3095) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3095) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3095) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3095) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3095) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_001103438.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3095 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3095 /gene="CG33181" /locus_tag="Dmel_CG33181" /gene_synonym="CG1521; CG32714; Dmel\CG33181" /map="7F1-7F2" /db_xref="FLYBASE:FBgn0053181" /db_xref="GeneID:318916" CDS 831..2921 /gene="CG33181" /locus_tag="Dmel_CG33181" /gene_synonym="CG1521; CG32714; Dmel\CG33181" /note="CG33181 gene product from transcript CG33181-RC; CG33181-PC" /codon_start=1 /product="uncharacterized protein, isoform C" /protein_id="NP_001096908.1" /db_xref="FLYBASE:FBpp0112363" /db_xref="GeneID:318916" /db_xref="FLYBASE:FBgn0053181" /translation="MSCICEYSLERSQINAKMSLPNEQTNLPHNPSQPASADTQTPAT ATGTTTPSTPTPSTRTTQPNELKHRLTPLNVRRLSGYVNPQAISDNAGDDPPPTTINI GLFNNNNNNNTNNNNNNNNNNNNTASTTPPSAYATPPIYQQQLSTLTATTPLDVAPDD KYRLFTIFNGNDPDNEKLSGLPHSTTGSLSSIITTSIASSEPDPGAVSGGGGGGGGGG GGGGIGGAGGGGGGGGGNGGIGSGALVAADASSIAGINGSSEEKLALNRPGIKQEKWT TILLQVSIPFFLAGIGTIGAGIVLGRVEKWYVFKNVSELFILVPALLGLKGNLDMCLA SRLSTQVNLGNMTSRQGVIRMIVGNIALVQVQATVASFLVAMFAVSVGAAMTGDFYFE NMMLLTASAMFTATSSCFVLDFVLVAVILFSQKYRLNPDNLATPLAASIGDVVSISLL SFIASLLYDHIKTHLWITFIVVTCYLVLLPMWVMIVLRNEYTRPVLKSGWVPVLSALC ISGLGGLVLDAAVEVFNGFVVFQPIINGIGGNLVSVQASKISTMLHQSSIIGIIPPHT QIFEWPWRALFKGVPYAKTARILIAMSIPGNVLFIFAADYINYSTSTVTWVFVLSYLT ASLVQVMLLLYIAHIIVHAMWKWKIDPDNSAIPYLTALGDLLGSSLLAVAWLFTMSVG MQYGSGMETLNAPN" misc_feature 1662..2201 /gene="CG33181" /locus_tag="Dmel_CG33181" /gene_synonym="CG1521; CG32714; Dmel\CG33181" /note="Permease, similar to cation transporters [Inorganic ion transport and metabolism]; Region: MgtE2; COG1824" /db_xref="CDD:441429" misc_feature 2421..2813 /gene="CG33181" /locus_tag="Dmel_CG33181" /gene_synonym="CG1521; CG32714; Dmel\CG33181" /note="Divalent cation transporter; Region: MgtE; pfam01769" /db_xref="CDD:460317" ORIGIN 1 tttctgttac cttcaaattg ttcttgttac tgtcgttgct gttgttgctg gcccgctttt 61 tagggggtgg aaaatgccgc tttccacacg gcgcactgtt gttcttgttc atcagactca 121 gttcgaaatt gcgagtcaat gaagccagga gcaaactttc agttcgcgct gttaccgcga 181 caaaagttgt ctggaagaga tccatatcaa cggtccggtg actaagctca acctctcaac 241 ctcgacctca gcctcagtcc ttctacctac tacctactac ctactacctc tcactatccc 301 cagtagtacg acatcctggc ccccaaaaac cacggacatt acgacgcaca catcctgcga 361 cagacacacg gcgccccaac atttcccaca ttttcaataa aatgtaaacc aaacgattct 421 ccggattctt tcaattcttg ttccgatttg tattcttcat tcattcctta aacaaaaaac 481 cgaaaaaaaa acgtaagcct acgtaatact gaacagcaat caatgcactt tccataattc 541 ttaacttatt atatatatta tttatcgaaa aataaaacca tcttgtgata tctttttttg 601 tgtttagtca taggttgaaa aaaaaaatag aaagaaaaaa accaaaacaa aaagtatgca 661 aaacccatag acaagtaatt cttaaaaaaa aaaataaaac aaaaaactat atttattaga 721 gcacagttta taatttgtgt tgaatgttta gtttccgttg attttaagcc aatttatagt 781 ttcaaagcct agacactcag gatttagttc aaatattagt agtttagtcg atgagttgta 841 tttgcgaata ctcgcttgag agaagccaaa tcaatgcgaa aatgtcgctg cccaacgaac 901 agacaaactt gccgcacaat cccagccaac cagcatccgc agacacacag acaccagcca 961 cggcaacagg aaccacaaca ccatccacac caacaccatc cacaagaacc acacaaccaa 1021 atgagctgaa acaccgcctg acgccactga atgtgcgtcg tttatcgggc tacgttaatc 1081 cgcaagcgat cagcgataat gctggcgatg atcccccgcc caccaccatt aacattggcc 1141 tcttcaacaa caataacaat aataatacaa ataataataa taataataac aacaacaaca 1201 acaacacagc atcaacaacg ccaccatctg catatgccac accaccaata taccaacaac 1261 agttgtccac actgacagca acaacaccgc tagatgtggc accggatgat aaatacagat 1321 tgtttaccat tttcaatgga aacgatcccg acaatgagaa attgtcgggc ctaccacatt 1381 cgacaaccgg ttcactaagc tcaatcatca cgacgtccat agcatcctcc gaaccggatc 1441 ctggagcggt gagcggcggc ggcggcggcg gcggcggcgg cggcggcggc ggcggaatag 1501 gaggagcagg tggcggcggc ggcggcggcg gaggcaatgg cggtatcgga tcgggtgccc 1561 tggtggcagc ggatgcctcc agcattgccg gcatcaatgg cagctccgag gagaagttgg 1621 cgctcaatcg acccggcatc aagcaggaga agtggacaac tatcctactg caggtatcca 1681 ttccgttctt tctggccggg attggtacca tcggagctgg cattgtcctg ggacgcgttg 1741 agaaatggta tgtcttcaag aacgtaagcg agctgttcat cctggtgccg gcacttttgg 1801 gtctcaaggg caacctggac atgtgcctgg catcgcgtct ctccacgcaa gtgaatctgg 1861 gcaacatgac cagcagacag ggcgtaatac ggatgatagt ggggaacata gcactggtgc 1921 aggtccaggc gacggtggcc tcctttctgg tggccatgtt tgcggtgagc gtgggcgcgg 1981 ccatgaccgg tgacttctat ttcgagaaca tgatgctgct gactgcctcg gccatgttca 2041 cggccacctc gtcgtgcttt gtgctggact tcgttttggt ggctgtaatc ctgttctcgc 2101 agaagtaccg cctcaatccg gacaacctgg ccacaccgtt ggccgcctcc attggtgacg 2161 tggtgtccat cagtttgctc tcctttatcg cctcgctgct gtacgatcat atcaaaacgc 2221 acctgtggat cacattcatc gtggtcacct gctacctggt gctgttgccc atgtgggtga 2281 tgatcgtgct gaggaacgag tacacgcggc cggtgctaaa gagcggatgg gttcccgtcc 2341 tctcggccct ctgcataagt ggtctgggtg gccttgtgtt ggatgccgcc gtcgaggtgt 2401 ttaatggatt cgtagtgttt caaccgatca tcaacggaat cggcggcaat ctggtatcgg 2461 tgcaggccag caagatatcc acaatgctgc accagagctc aattatcggg attataccac 2521 cgcacacgca gatcttcgag tggccttggc gggcgctctt caaaggagtt ccctatgcga 2581 agacagcgag gatacttatt gccatgtcca tacccggcaa tgttctgttc atctttgctg 2641 ctgactatat aaactatagc acctcgacgg tcacctgggt gtttgtgctt tcctatttga 2701 ccgccagttt ggttcaggtg atgctgctgc tgtatattgc ccacatcatt gtgcacgcga 2761 tgtggaagtg gaagatcgat ccggataact cggccatacc ctacctgacg gccttgggcg 2821 atctgctcgg cagcagtctg ctggcggtgg cgtggctctt caccatgtcg gtgggcatgc 2881 agtacggatc cggaatggag acactaaacg cacctaacta atgtagctaa cgaaataggg 2941 agtacggagt aacgtagaac gataaacaag gcagccacac atacacacac accatacaat 3001 ataaagaact gttatgtacc taaaacaaat atacagaaaa catagaaatt gtacgtatag 3061 ccagcctcct ccagccaccc aaaaatctta aatcc