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LOCUS NM_001014707 2999 bp mRNA linear INV 26-DEC-2023 mRNA. ACCESSION NM_001014707 VERSION NM_001014707.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2999) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2999) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2999) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2999) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2999) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2999) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2999) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2999) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2999) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2999) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2999) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2999) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2999) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2999) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2999) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2999) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2999) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2999) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On May 8, 2012 this sequence version replaced NM_001014707.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2999 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2999 /gene="ewg" /locus_tag="Dmel_CG3114" /gene_synonym="CG3114; Dmel\CG3114; EC3; EG:BACR37P7.7; Ewg; EWG; l(1)1Ag; l(1)DA659; l(1)EC3; l(1)EC3f; l(1)VA720; l[EC3]; NRF-1" /note="erect wing" /map="1A1-1A1" /db_xref="FLYBASE:FBgn0005427" /db_xref="GeneID:30975" CDS 562..2199 /gene="ewg" /locus_tag="Dmel_CG3114" /gene_synonym="CG3114; Dmel\CG3114; EC3; EG:BACR37P7.7; Ewg; EWG; l(1)1Ag; l(1)DA659; l(1)EC3; l(1)EC3f; l(1)VA720; l[EC3]; NRF-1" /note="CG3114 gene product from transcript CG3114-RG; non-AUG (CUG) translation initiation; CG3114-PG; ewg-PG; erect wings" /codon_start=1 /product="erect wing, isoform G" /protein_id="NP_001014707.1" /db_xref="FLYBASE:FBpp0100036" /db_xref="GeneID:30975" /db_xref="FLYBASE:FBgn0005427" /translation="MATTSYRLVVAPAGSQRSSTGNVVVTTTSSGSHSSNGANGGTGG TSAGSSTLGSGLNVTTITATSGGQLQSAGNTSQSNGTTYKIEMLEEDIQSLGSDDDDE DLISSDGSLYEGDLGSMPVNDDVAHQLAAAGPVGVAAAAAIASSKKRKRPHCFETNPS VRKRQQNRLLRKLRAIIYEFTGRVGKQAVVLVATPGKPNTSYKVFGAKPLEDVLRNLK NIVMDELDNALAQQAPPPPQDDPSLFELPGLVIDGIPTPVEKMTQAQLRAFIPLMLKY STGRGKPGWGRESTRPPWWPKELPWANVRMDARSEDDKQKISWTHALRKIVINCYKYH GREDLLPTFADDEDKVNALISQSGDEDEDMELSNPPTIHTVTTMTPPTGNSNYTTQTV LSQNADGTVSLIQVDPNNPIITLPDGTTAQVQGVATLHQGEGGATIQTVQSLTDVNGH ENMTVDLTETQDGQIYITTEDGQGYPVSVSNVISVPVSMYQSVMANVQQIQTNSDGTV CLAPMQIGKLENFRGPLDLWRMATSWRPSPCRLECTR" misc_feature 994..1593 /gene="ewg" /locus_tag="Dmel_CG3114" /gene_synonym="CG3114; Dmel\CG3114; EC3; EG:BACR37P7.7; Ewg; EWG; l(1)1Ag; l(1)DA659; l(1)EC3; l(1)EC3f; l(1)VA720; l[EC3]; NRF-1" /note="NLS-binding and DNA-binding and dimerization domains of Nrf1; Region: Nrf1_DNA-bind; pfam10491" /db_xref="CDD:463112" ORIGIN 1 gctttccttc gactgcgata tgtattgcgt gtacattatc gacgtctgaa aaaatcacgc 61 gtgctgtata tcgatatttg tcatgtacta aataccattc ctcggctaaa ttaaatcgca 121 aaattgcgtc gaaacttggg gaaaagtgct gggacaggca gctgaaaact aagctaacgg 181 aaaagcatcg tgagggaaaa cagcgaaact ttgcgagcgg gaaattttgg agctacaacc 241 tagaaacggc agtgcgcaaa tgtaaaatgc acggaatatt cgcatgtgca gtgtgataat 301 aaataaacgc caaagaaaat tttcggcgca ggggcaaaca caccaatgca caatagcggc 361 ggcgcgttcg tgtgcgtgcg cctttttttt ctttgtgagt gtgtatgtgt gttatcataa 421 aggagctgga aaaacaacaa aaatacacag ttttatcaca ctgtgcatgc gagtaagacc 481 gttctcaatc cagtgagtaa ggcttgagga aagaagagga tcggaagcag aaaggttcaa 541 aagggaatcc ccaccgccaa actggccacc acaagctatc ggctagtcgt ggcgccggcg 601 ggcagccaaa ggagttcgac tggaaatgtg gttgtcacca ccacctcctc gggtagtcac 661 tcctcgaatg gggctaacgg aggtacagga ggaacttctg ccgggagcag cactttggga 721 agcggcctca acgtgactac aataacagca accagcggcg gccagctgca aagtgccggc 781 aacacttccc agagcaacgg aaccacctac aagatcgaaa tgctggaaga ggatatccag 841 agcttgggct ccgacgatga cgacgaggat ctaatcagca gtgatggcag tttatacgag 901 ggagatctgg gttccatgcc agtgaatgat gatgtggccc accaactagc ggccgcagga 961 ccagtaggcg tggcagcagc ggcagcaata gcgagttcta aaaagcgaaa gagaccccat 1021 tgtttcgaaa cgaatccctc ggttagaaaa aggcaacaaa atcgattgtt gcgcaagctg 1081 agagctatta tctatgagtt tacgggcaga gtgggcaaac aagcggtagt tttggtggca 1141 acaccgggta aacccaacac aagctataag gtttttggag ccaaacccct ggaagatgtg 1201 ttgcgcaacc taaaaaacat tgtaatggat gaactggaca atgcactggc ccagcaagct 1261 ccccctccgc cccaagatga tccatcgctc ttcgaacttc ctggcttggt aatcgatggt 1321 attcccactc ccgtagaaaa gatgacccaa gcgcagctaa gagcctttat tccgctgatg 1381 ctcaagtatt ctacgggacg agggaagcca ggatggggca gggagtctac cagaccgccc 1441 tggtggccaa aggagctacc ctgggccaat gtgaggatgg atgcccgttc agaggatgac 1501 aaacagaaga tcagctggac acatgctcta cgcaagattg tgatcaactg ctacaagtac 1561 catggaaggg aggatctgct gcccaccttt gccgatgacg aggataaggt taacgcgttg 1621 atttcgcaat cgggcgacga agacgaggac atggagcttt caaatcctcc taccatccac 1681 acggtgacga caatgacgcc gccgacgggc aacagcaatt acaccacgca aacggtcctc 1741 tcacagaacg ccgatggtac cgtatcgcta atccaggtag acccaaataa tccaattatc 1801 acactgccgg atggtacaac tgcccaggtt caaggtgttg ccacgctcca ccaaggtgaa 1861 ggcggtgcta ccattcaaac cgttcagagt ctcactgatg taaatggtca tgagaacatg 1921 accgtagatc tcaccgagac acaggatggg caaatatata ttacaacgga ggatggccaa 1981 ggatatcccg tttcggtgag caatgtgatc tcagttcccg tctctatgta ccagtcggta 2041 atggccaacg tgcagcagat ccagacgaac agcgatggaa cagtgtgcct cgcgccgatg 2101 cagataggaa aactggagaa ttttcgagga ccccttgatc tgtggagaat ggcgaccagc 2161 tggagaccat caccatgtcg cctggaatgc accagatgat gatccaagga ggtcctggcc 2221 aagagccgca gctggtccag gtggtcagct taaaggatgc cactctgcta agcaaggcta 2281 tggaggccat taattccggc aacgtaaagt ccgaagacac gattattatg gaacaatagc 2341 tggagcccat agaaggcatg atttcgcctg gattaagcga ttgacgtgcc atgttttctg 2401 ggcatcgtag ctctcctgac tgactacccg tctataactt agggttcctt ttgccccaca 2461 aaaaaaatgt tttccaagta cctgaaaggt gttgctaacg gagacagaag caataggaac 2521 cccatggtcc cgtctaccca aatataaacc atctagtcat cgcatgtata gttaagagtg 2581 ctttccacca ggaaaggact ttagactttg catatataaa tatctttaac tactcgtaaa 2641 accctaattc ctactatttt ttgtgagttt ttttttgctc taaaataata taaatctaaa 2701 ttttattagc tataaaattg taacaaacgt atgccgaggt gtaaacatta taagcgttac 2761 ttgtaggtgg gactttacat atatggtaaa cttgtgcaac attcgctatg tctaaccaac 2821 tgaataaaaa attaagagaa agataagagt ttataactta tacaattaac ttaggacaac 2881 tcataaagaa cgcaatgcaa tgtaaccaga gagcatcaca ttaaacataa cgtattatat 2941 aatagctaac gattatcgtt actactcata attattaaat aaacaaaaga gtgtacaac